Pairwise Alignments

Query, 311 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 320 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 71/294 (24%), Positives = 127/294 (43%), Gaps = 8/294 (2%)

Query: 19  DYWKEVVCRHCLAADSK-PLSQSSFDGALAINTLGDLDICSLSSPLHYWERSERHLRSGP 77
           D W   +   C   D++   ++S F G ++    G L + +L +     +R   +     
Sbjct: 12  DTWNRDLRATCGHFDTELAFNRSLFIGEVSNFHRGGLALANLRTNAGSIKRHLPNADHDD 71

Query: 78  AEDLWLGFSRNGHGQIEQGGRKASLAAGNLFLYDATQAFRFS-FGGTENHLVRIPRALLT 136
            +D +L   R+G+ +I Q G    LA G L L D+  A   S FG  E+ ++ + R  ++
Sbjct: 72  DQDCFLVSQRSGYCRITQNGLSIQLAPGELLLMDSVGALEISPFGLIEHAVLSLSRQDVS 131

Query: 137 ERLPRIADYTAMVLDDRRPG---VVPLREMLRQAASSPMSL-QDEHISNRYSGALIDLLV 192
            +L         V   +  G    V + ++ R       +  + E + + +   L   L 
Sbjct: 132 RQLGGETKTFGKVSSSKACGRMLHVLMDQLCRDTPDGEGAAGEGEALQSAFVSLLGSALE 191

Query: 193 ISLELQDLKTTHQELDLYGRIMQYIQRHLTEPDLSIDVIAQAHNVSTRTVTRAFARYQKT 252
            S + +D     Q   L   + + I   LT+P LS   +A   N+S R + R F     +
Sbjct: 192 HSSDARDEGVALQGSHLRSYVQKVIDESLTQPGLSPVGLANRLNISVRHLYRLFEEQDDS 251

Query: 253 PVAEIWKERLNASREAIERGQVR--SVSQAALDFGFSDFSHFSHAFRKAFGVAP 304
               I + RL  S + +    +R  S++  A  +GF+D +HFS +F+K F ++P
Sbjct: 252 VCRYIQRARLKRSADDLTNPFLRDESITSIAYKWGFTDSAHFSRSFKKQFELSP 305