Pairwise Alignments

Query, 788 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 791 a.a., surface antigen (D15):Surface antigen variable number from Pseudomonas syringae pv. syringae B728a

 Score = 1130 bits (2923), Expect = 0.0
 Identities = 562/790 (71%), Positives = 666/790 (84%), Gaps = 10/790 (1%)

Query: 6   LLCSVALLLNASLALAQGFKISDIRINGLQRVSAGSVFGALPLNVGDEADDRRLVDSTRA 65
           LL +V   L  +   A+ F ISDIR+NGLQRVSAGSVFGALPLNVG++ADD RLVD+TR+
Sbjct: 5   LLTAVLSALMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDGRLVDATRS 64

Query: 66  LFKTGYFQDIQLSREGDVLIINVVERPSVASIEFEGNKAIATDDLMKGMKQSGLSESEIF 125
           LFKTG+FQDIQL R+G+VL+INVVERPSVASIE EGNKAI+T+DLMKG+KQSGL+E EIF
Sbjct: 65  LFKTGFFQDIQLGRDGNVLVINVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAEGEIF 124

Query: 126 QRATLEGLRNELQRQYVAQGRYSASVDTEVVPQPRNRVGLKIKIDEGEVASIQHINVVGN 185
           QRATLEG+RNELQRQYVAQGRYSA VD EVVPQPRNRVGLKI I+EG VASIQHINVVGN
Sbjct: 125 QRATLEGVRNELQRQYVAQGRYSAEVDAEVVPQPRNRVGLKININEGTVASIQHINVVGN 184

Query: 186 TVFADAALLDQFTLKTSNWLSFFRNDDKYAREKLSGDLERLRSFYLDRGYINMDIASTQV 245
            VF+D  L D F LKTSNWLSFF+NDDKYAREKLSGDLERLRS+YLDRGYINMDIASTQV
Sbjct: 185 KVFSDEDLTDLFELKTSNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIASTQV 244

Query: 246 SMTPDKKHVYITVNIQEGQKYTVRDVKLSGELKVPQDQVQALLLVKKGQVFSRKLMTTTS 305
           S+TPDKK+VYITVNI EG+KY+V+ VKLSG+LKVP+DQV++LLLV+ GQVFSRK+MTTTS
Sbjct: 245 SITPDKKNVYITVNINEGEKYSVKSVKLSGDLKVPEDQVKSLLLVQPGQVFSRKVMTTTS 304

Query: 306 DLITRRLGNDGYTFANVSGTPQVHEADHTVDITFSVEPGKRAYVNRINFRGNTKTDDKVL 365
           +LITRRLGN+GYTFANV+G P  +  DHTVDITF V+PGKRAYVNRIN+RGNTK++D+VL
Sbjct: 305 ELITRRLGNEGYTFANVNGVPTPNNEDHTVDITFVVDPGKRAYVNRINYRGNTKSEDEVL 364

Query: 366 RREMRQMEGGWASTYLIDQSKVRLERLGYFKEVNVETPAVTGLDDQLDVNYAVQEQASGS 425
           RREMRQMEGGWASTYLIDQSK RL+RLG+FKEVNVETP V G DDQ+DVNYAV+EQASGS
Sbjct: 365 RREMRQMEGGWASTYLIDQSKTRLDRLGFFKEVNVETPPVPGTDDQVDVNYAVEEQASGS 424

Query: 426 ITASVGFAQSSGLILGGSITQNNFLGTGNSASLGLTRSSYQSKYNIGFTDPYFTRDGVSL 485
           ITASVGFAQS+GLILGGSI+QNNFLGTGN  S+GLTRS YQS+YN  + DPY+T DGVSL
Sbjct: 425 ITASVGFAQSAGLILGGSISQNNFLGTGNKVSIGLTRSEYQSRYNFSYVDPYYTPDGVSL 484

Query: 486 GYNAFYNKTDYNKYYDDGVSYYAINSYGLGASLGYPINETSRLSFGLTAQHDSIEPGTYS 545
           GY+AFY  T+Y+   D  V+ YA++S G G +LGYPI+ETSRL++GLT Q D I+ G Y+
Sbjct: 485 GYSAFYRTTNYDD-LDVDVASYAVDSLGAGINLGYPISETSRLTYGLTVQQDEIKTGKYT 543

Query: 546 ADEIYDFIEREGKQFTNFKANLGWSESTLNKGVLATRGHAQNLNLTVTVPGSDLSFYKID 605
            DEI+DF+E+EG ++ NFK ++GWSESTLNKGVLATRGH+Q+L    T+PGSDLSF+K+D
Sbjct: 544 VDEIFDFVEKEGDKYLNFKGSVGWSESTLNKGVLATRGHSQSLVFESTLPGSDLSFFKLD 603

Query: 606 YTGQTFLPVSNNTALRLHTKLGYGNGYGSTDGLPFYESYTAGGEGTVRGFESGTLGPRST 665
           Y  Q F P+++N  LRLHT+LGYG+GYGST GLPFYE+Y AGG  +VRGF+  TLGPRST
Sbjct: 604 YRAQYFHPITDNYTLRLHTELGYGDGYGSTSGLPFYENYYAGGFNSVRGFKDSTLGPRST 663

Query: 666 PATGTYASAGQAYYSDRDTEALGGNILITGGAEYLFPVPFIKDNKSVRTSLFWDVGSVYS 725
           P+ G  +  G     D+D    GGN L+ GG E +FP+PF+KD +S+RTS+FWDVG+V+ 
Sbjct: 664 PSNG--SKPGTLADPDQDPLPFGGNALVQGGVEVMFPLPFVKDQRSLRTSVFWDVGNVFD 721

Query: 726 DKCYLSTTQG------CGGVDLSQMASSVGVGVTWYSPLGPLSVNLAYPIRTPEN-ADKQ 778
            KC  + T        C  +DLS MASSVG+GVTW + LGPLS  LA PI+ P++ A+ Q
Sbjct: 722 TKCDSTRTSASGKKVECNDIDLSGMASSVGIGVTWITALGPLSFALAMPIKKPDDEAETQ 781

Query: 779 VFQFSMGQTF 788
           VFQFS+GQTF
Sbjct: 782 VFQFSLGQTF 791