Pairwise Alignments

Query, 227 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

 Score =  159 bits (402), Expect = 4e-44
 Identities = 90/229 (39%), Positives = 142/229 (62%), Gaps = 5/229 (2%)

Query: 4   VLLVDDDQELTEMLRQYLECEGFEATAVHTGEAGEAEALSGRYSIVVLDVMLPQRSGIEV 63
           VL+VDDD  L  +L +YL  +GF+  +V  GE  +       + ++VLD+MLP   G+ +
Sbjct: 7   VLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDGLSI 66

Query: 64  LRRIR-AVSQVPVVLLTARGDNIDRITGLELGADDYVPKPSSPGELVARLRAIMRR--VQ 120
            RR+R + + +P+++LTA+GD IDRI GLE+GADDY+PKP +P EL+AR++A++RR  ++
Sbjct: 67  CRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLRRQVIE 126

Query: 121 AVGQPTTE--VIKTGSLVLWPGKRQAVWNGAELGVTSTEFSLLEELARCAGQVVSKKDLS 178
           A G P+ E  +I+ G   L  G R+       + +TS EF++L+ L   A + +S+  L 
Sbjct: 127 APGAPSAEETIIEFGEFRLNLGTREMFRGEEAMPLTSGEFAVLKALVTNAREPLSRDKLM 186

Query: 179 LNALGCPLTRYDRRIDVHISSIRQKLGPRPDAKAWIQSVRGLGYLLIAE 227
             A G   +  +R IDV IS +R+ L   P    +IQ+V GLGY+ + +
Sbjct: 187 NMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVFVPD 235