Pairwise Alignments

Query, 268 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 274 a.a., ABC-type polar amino acid transport system protein, substrate-binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  105 bits (262), Expect = 1e-27
 Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 4/256 (1%)

Query: 7   LLMAVSLGFCTQWASAAPQVPERLKTVDKLVYCSGMDSPPLVSFDEAQKP-RGLTVDLGL 65
           ++ A+  G      + A ++P  +K   ++V     + PP+   D A     GL  DLG 
Sbjct: 5   VIPALLAGVMASGVTVATELPASIKAKGEIVVAIMPNYPPMDFKDPATNTLTGLDYDLGN 64

Query: 66  EVAKRLGDKQVQWRVIPFSGLVPALLAQQCDMIVDQLFDKPERRQVIDIVNYMYSSQSVV 125
            +A+RLG K ++W+   F  ++ AL   + DM++  + D  ER+  +  ++Y  S     
Sbjct: 65  ALAERLGVK-IKWQETGFEQMINALTTDRVDMVLSGMTDTAERQASVTFIDYFTSGPQFY 123

Query: 126 VPKGNPKGIKALDDLSGHKVAVLNGSTIKT-LLDAQNDSLTKAGKPPMKLVVYNSDTDAF 184
             + N K    + DL G KV     +T  T + +    +   AGKP + ++      DA 
Sbjct: 124 TLQKN-KDTNEIVDLCGKKVGTSRRTTFPTEIAEWSKANCEAAGKPAINVIGTEGSADAR 182

Query: 185 QALRISQVDAYGTTVETAGYYAAMAPDLFQEGVPAFSRILTGLGMRKDDPQLSAAVQQVI 244
             LR S++DA     ET  Y      D+++      S   +G+G+ K  P+LS AV+  +
Sbjct: 183 AQLRQSRIDAAMQGSETLPYLKTQEKDMYKTVGLPISEQFSGMGVSKKKPELSEAVKVAL 242

Query: 245 SDMRSDGSYVALLNKW 260
             M  DGSY A+L KW
Sbjct: 243 QSMIDDGSYQAILKKW 258