Pairwise Alignments

Query, 563 a.a., general secretion pathway protein GspE from Pseudomonas simiae WCS417

Subject, 585 a.a., type II secretion system protein E (GspE) from Pseudomonas syringae pv. syringae B728a

 Score =  949 bits (2453), Expect = 0.0
 Identities = 488/573 (85%), Positives = 531/573 (92%), Gaps = 11/573 (1%)

Query: 1   MSSAPIDACQMQIPHTEQVCAWLMQHAGLKTVDLERARRLSTD----DLLSLLTRLGLVS 56
           M SAP+D  ++ IP  +QVCAWL+++AGLKT DLERA+RL  +    +LL LLTRLGLVS
Sbjct: 12  MPSAPVDVSRLLIPDAQQVCAWLIENAGLKTADLERAQRLQQESEGTELLGLLTRLGLVS 71

Query: 57  EVELARAWAALLGAPLLLADAAPPLLDPLPVLTERFMRHYQVVPMGWTQGGLRVLAANPA 116
           E ELARAWAALL APLLLADA PPLLDPLP LTERFMRHYQVVP+GW+  GL+VL+ANP 
Sbjct: 72  EFELARAWAALLQAPLLLADAVPPLLDPLPPLTERFMRHYQVVPVGWSDQGLQVLSANPG 131

Query: 117 QLYPFQALAYACQVPVWLAIGPRNEVDTLIERYYGQGRSAMGTLIENLDEQGGAEEDIEH 176
            LYPFQA+AYAC+VPV L+IGPRNEV+TLIERYYGQGRSAMGTLIENLDE+GG+ EDIEH
Sbjct: 132 TLYPFQAIAYACEVPVRLSIGPRNEVETLIERYYGQGRSAMGTLIENLDEEGGSLEDIEH 191

Query: 177 LKDMASEAPVIRLVNLILQRAVEQRASDIHIEPFENQLKVRYRIDGVLHDAEAPPASSSA 236
           LKD+ASEAPVIRLVNLILQRAVEQRASDIHIEPFE+QLKVRYRIDGVLH+AEAPP+SSSA
Sbjct: 192 LKDLASEAPVIRLVNLILQRAVEQRASDIHIEPFESQLKVRYRIDGVLHEAEAPPSSSSA 251

Query: 237 AVISRVKIMARLDIAERRLPQDGRIMLRIQGKELDLRVSTVPTSFGESVVLRLLDRQTVQ 296
           AVISRVKIMARLDIAERRLPQDGRIMLRIQGKELDLRVSTVPTSFGESVV+RLLDRQT+ 
Sbjct: 252 AVISRVKIMARLDIAERRLPQDGRIMLRIQGKELDLRVSTVPTSFGESVVMRLLDRQTIN 311

Query: 297 FDFPSLGFDGQRLASFLDLLERPHGILLVTGPTGSGKTTTLYTALSRLNTTERKIITVED 356
           FDFPSLGFDG+RL  FLD+LERPHGILLVTGPTGSGKTTTLYTALSRLNT ERKIITVED
Sbjct: 312 FDFPSLGFDGERLDEFLDVLERPHGILLVTGPTGSGKTTTLYTALSRLNTAERKIITVED 371

Query: 357 PVEYQLEGINQIQVKPAIGLDFAGALRSIVRQDPDVIMIGEIRDLETCRIAIQSSLTGHL 416
           PVEYQLEGINQIQVKP+IGLDFAGALRSIVRQDPDVIMIGE+RDLETCRIAIQSSLTGHL
Sbjct: 372 PVEYQLEGINQIQVKPSIGLDFAGALRSIVRQDPDVIMIGEMRDLETCRIAIQSSLTGHL 431

Query: 417 VLSTLHTNSAAASITRLMDMGVESYLIASTVSGILAQRLVRRLDPVTRVAFEAPPELIAE 476
           VLSTLHTNSAAASITRL+DMGVESYLIASTV+GILAQRLVRRLDP TR AF+APPELIAE
Sbjct: 432 VLSTLHTNSAAASITRLLDMGVESYLIASTVNGILAQRLVRRLDPATREAFDAPPELIAE 491

Query: 477 HGLDRLTEQRPILLYR-------GDYHGRSALTELLVMNDELRSLLMRHADAATLEQAAR 529
           HGL+R T++RPI LYR       G Y GRSA+TELLVMN+ELRSLLMRHADA+TLE+AAR
Sbjct: 492 HGLERFTDERPIRLYRPRADAPGGGYRGRSAITELLVMNEELRSLLMRHADASTLEEAAR 551

Query: 530 RAGLRTLYEEGLRQALAGITSLEEVLRVTRGEG 562
           R GLRTL+EEGLRQA+AG+TSLEEVLRVTRGEG
Sbjct: 552 RGGLRTLHEEGLRQAVAGVTSLEEVLRVTRGEG 584