Pairwise Alignments

Query, 398 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

Subject, 405 a.a., type II secretion system protein F from Pseudomonas fluorescens FW300-N2C3

 Score =  190 bits (482), Expect = 7e-53
 Identities = 119/397 (29%), Positives = 204/397 (51%), Gaps = 2/397 (0%)

Query: 3   LFKFRALDSQGVPQNGTLEAVDQVAAVAALHKRGLLLLQIEAAGSPLLRNPRGQLKGAAL 62
           ++ +   D +G    G L         A L K+G+   ++    + +    + ++K   +
Sbjct: 10  VYTWEGKDRKGAKMTGELTGQSPALVKAQLRKQGINPEKVRKKSTSIFSKGK-RIKPLDI 68

Query: 63  VSFTQQLATLLGAGQPLERSLSLLLKQPGQPQVRALIGRIRDHVKAGKPLSAALEEEGGS 122
             FT+Q+AT+L AG PL ++  ++ +      +R L+ +++  V AG   +A+L +    
Sbjct: 69  ALFTRQMATMLKAGVPLLQAFDIIGEGFDNANMRKLVDQVKQEVAAGNSFAASLRKCPQY 128

Query: 123 FSPLYLSMVRAGEAGGALENTLRQLSDYLERSERLRGEVINALIYPAFLVVGVLGSLALL 182
           F  LY ++V AGE  GAL+  L +++ Y E+SE L+ ++  A+ YP  +++       +L
Sbjct: 129 FDDLYCNLVDAGEQAGALDTLLDRVATYKEKSEALKAKIKKAMTYPTAVILVAAVVTGIL 188

Query: 183 LAYVVPQFVPIFQDLGVPIPWITEVILALGEFLGAYGLLVLAGLI-VSGGCWAARLRNPA 241
           L  VVPQF  +F   G  +P  T +++ L EFL  +  +VL GL+    G   A  R+  
Sbjct: 189 LVKVVPQFESVFSGFGAQLPAFTVMVIGLSEFLQDWWWVVLGGLVGTFFGVKYALRRSER 248

Query: 242 FREQYDRRLLGVRGIGPLLQRVEAARLTRTLGTLLSNGVALLQALVIARQVCTNRALQAQ 301
           FR+  D+ LL +  IG L+ +   AR  RTL T  + GV L++AL        N   +  
Sbjct: 249 FRDWRDKWLLKLPLIGALMYKSAVARYARTLSTTFAAGVPLVEALDSVSGATGNVVFKRA 308

Query: 302 VGSAAESVKGGGTLASAFGSQPLLPELALQMIEVGEQAGELDSMLLKVADIFDVEAKRGI 361
           V    + V  G  L  +  +  + P LA+QM  +GE++G LD ML KVA  ++ E    +
Sbjct: 309 VQRIRQDVSTGMQLNFSMRASGIFPNLAIQMTAIGEESGALDDMLDKVASFYEAEVDNLV 368

Query: 362 DRLLAALVPSLTVVMAVLVAVIMLAIMLPLMSLTSNI 398
           D L + + P + V++ V+V  +++A+ LP+  L S I
Sbjct: 369 DNLTSLMEPFIMVILGVVVGGLVVAMYLPIFQLGSAI 405