Pairwise Alignments

Query, 398 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

Subject, 401 a.a., type II secretion protein F from Klebsiella michiganensis M5al

 Score =  218 bits (554), Expect = 3e-61
 Identities = 142/399 (35%), Positives = 223/399 (55%), Gaps = 5/399 (1%)

Query: 1   MSLFKFRALDSQGVPQNGTLEAVDQVAAVAALHKRGLLLLQIEAA---GSPLLRNPRGQL 57
           M+LF+++ALD QG P+ G  +A     A   L ++G L L I+ A   G P     R   
Sbjct: 1   MALFRYQALDEQGKPRRGVQQADSARHARQLLREKGWLALDIDPAAGGGRPSRFMRRTSA 60

Query: 58  KGAALVSFTQQLATLLGAGQPLERSLSLLLKQPGQPQVRALIGRIRDHVKAGKPLSAALE 117
           +  ALV  T+QLATL+ A  PLE++L  + +Q  +PQ++ LI  +R  V  G  L+ A+ 
Sbjct: 61  RDLALV--TRQLATLVAAAIPLEKALDAVAQQSEKPQLKTLIAGVRGKVLEGHSLAEAMR 118

Query: 118 EEGGSFSPLYLSMVRAGEAGGALENTLRQLSDYLERSERLRGEVINALIYPAFLVVGVLG 177
              G F  LY +MV AGEA G L+  L +L+DY E+ ++LR  ++ A+IYP  L +  + 
Sbjct: 119 GHPGCFDALYCAMVAAGEASGHLDGVLNRLADYTEQRQQLRARLLQAMIYPIVLTLVAVS 178

Query: 178 SLALLLAYVVPQFVPIFQDLGVPIPWITEVILALGEFLGAYGLLVLAGLIVSGGCWAARL 237
            + +LL+ VVP+ V  F  L   +P+ T +++A+ + L A G  +L  +++        L
Sbjct: 179 VIVILLSTVVPKVVEQFIHLKQALPFSTRLLMAMSDMLRAAGPWLLLAILLLILLLRYLL 238

Query: 238 RNPAFREQYDRRLLGVRGIGPLLQRVEAARLTRTLGTLLSNGVALLQALVIARQVCTNRA 297
           R PA R  + R LL +  IG + + V +AR  RTL  L ++ V LL A+ I+  V +N  
Sbjct: 239 RQPAKRLAWHRLLLRLPLIGRVARSVNSARYARTLSILNASAVPLLLAMRISADVLSNAW 298

Query: 298 LQAQVGSAAESVKGGGTLASAFGSQPLLPELALQMIEVGEQAGELDSMLLKVADIFDVEA 357
            + Q+ +A+++V+ G +L  A     L P +   M+  GE++GEL+SML + AD  D + 
Sbjct: 299 AKRQLEAASDAVREGVSLHRALEMTQLFPPMMRYMVASGERSGELNSMLERAADNQDRDL 358

Query: 358 KRGIDRLLAALVPSLTVVMAVLVAVIMLAIMLPLMSLTS 396
              I   L+   P L V MA +V  I+LAI+ P++ L +
Sbjct: 359 SAQIQLALSLFEPLLVVAMAGMVLFIVLAILQPILQLNT 397