Pairwise Alignments

Query, 398 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

Subject, 401 a.a., type IV pilin biogenesis protein from Klebsiella michiganensis M5al

 Score =  149 bits (375), Expect = 2e-40
 Identities = 110/393 (27%), Positives = 185/393 (47%), Gaps = 7/393 (1%)

Query: 3   LFKFRALDSQGVPQNGTLEAVDQVAAVAALHKRGLLLLQIEAAG-SPLLRNPRGQLKGAA 61
           L+++R +  QG P  GTL   ++  A+  L ++ ++ L +        L +PR    G  
Sbjct: 6   LWRWRGITLQGAPCQGTLWQDNRPEALQVLQQQRIIPLTLRRCSVQNALWHPR--YSGEI 63

Query: 62  LVSFTQQLATLLGAGQPLERSLSLLLKQPGQPQVRALIGRIRDHVKAGKPLSAALEEEGG 121
           +    +QLA LL AG PL   L LL +Q    Q +AL+  + + +  G  LS +LE+   
Sbjct: 64  I----RQLAALLQAGLPLAEGLELLAQQQPNAQWQALLQTLAEDLAQGISLSGSLEKWPE 119

Query: 122 SFSPLYLSMVRAGEAGGALENTLRQLSDYLERSERLRGEVINALIYPAFLVVGVLGSLAL 181
           +F PLYL+M+R GE  G LE    +L+        L  +V  AL YP  ++   L  +  
Sbjct: 120 AFPPLYLAMIRTGELTGKLELCCAELAQQQREQLLLTEKVKKALRYPLIILTLALLVVMG 179

Query: 182 LLAYVVPQFVPIFQDLGVPIPWITEVILALGEFLGAYGLLVLAGLIVSGGCWAARLRNPA 241
           +L +V+P+F  I+Q    P+PW+T V++++GE L  +  L+ A  I+         + P 
Sbjct: 180 MLCFVLPEFAAIYQTFNTPLPWLTRVVMSVGEGLTRFWPLLAALGILPAILNRLICQRPG 239

Query: 242 FREQYDRRLLGVRGIGPLLQRVEAARLTRTLGTLLSNGVALLQALVIARQVCTNRALQAQ 301
           +     + L  +   G LL     +++   L    S G++ LQ L    +       + +
Sbjct: 240 WLLYRQKLLHTLPVFGKLLCGQRLSQIFTVLALTQSAGISFLQGLQSVEETLNCPLWRQR 299

Query: 302 VGSAAESVKGGGTLASAFGSQPLLPELALQMIEVGEQAGELDSMLLKVADIFDVEAKRGI 361
           +      +  G  +  A  +      L LQ+I  GE +G LD+ML  +A     +  +  
Sbjct: 300 LRQVCRQITHGDPIWQALANSGGFTPLCLQLIRTGEASGSLDTMLANLARHHSEQTHQQA 359

Query: 362 DRLLAALVPSLTVVMAVLVAVIMLAIMLPLMSL 394
           D L   L P + VV   +V V+++A+ LP+  L
Sbjct: 360 DNLATLLEPMMLVVTGTIVGVLVVAMYLPIFHL 392