Pairwise Alignments

Query, 398 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

Subject, 407 a.a., general secretion pathway protein F (RefSeq) from Shewanella sp. ANA-3

 Score =  203 bits (516), Expect = 8e-57
 Identities = 132/406 (32%), Positives = 222/406 (54%), Gaps = 9/406 (2%)

Query: 1   MSLFKFRALDSQGVPQNGTLEAVDQVAAVAALHKRGLLLLQI--------EAAGSPLLRN 52
           M  F+++ALD++G    G +EA     A + L  + ++ L+I        ++ G+     
Sbjct: 1   MPAFEYKALDAKGKQLKGVIEADTARHARSQLRDQRMMPLEILPVTEKEAKSKGTGFSPF 60

Query: 53  PRGQLKGAALVSFTQQLATLLGAGQPLERSLSLLLKQPGQPQVRALIGRIRDHVKAGKPL 112
            RG +  A L   T+Q+ATL+ AG P+E  L  + +Q  + ++ ++I  +R  V  G  L
Sbjct: 61  KRG-ISVAELALITRQIATLVAAGLPIEECLKAVGQQCEKARLASMIMAVRSRVVEGYSL 119

Query: 113 SAALEEEGGSFSPLYLSMVRAGEAGGALENTLRQLSDYLERSERLRGEVINALIYPAFLV 172
           + +L E    F  LY +MV +GE  G LE  L +L+DY ER ++L+ ++  A+IYP  L 
Sbjct: 120 ADSLAEFPHIFDDLYRAMVASGEKSGHLEVVLNRLADYTERRQQLKSKLQQAMIYPIMLT 179

Query: 173 VGVLGSLALLLAYVVPQFVPIFQDLGVPIPWITEVILALGEFLGAYGLLVLAGLIVSGGC 232
           +  +G +++LLA VVP+ V  F+ +G  +P  T  ++A  +F+  YGL V+  + +    
Sbjct: 180 IVAIGVVSVLLAAVVPKVVGQFEHMGAELPATTRFLIAASDFVQHYGLFVILAIGILLVV 239

Query: 233 WAARLRNPAFREQYDRRLLGVRGIGPLLQRVEAARLTRTLGTLLSNGVALLQALVIARQV 292
           +   L++P F+ +Y   LL +  IG + + +  AR  RTL  L ++ V LL  + IA +V
Sbjct: 240 FQRLLKSPIFKMKYHTFLLKMPVIGRVSKGLNTARFARTLSILSASSVPLLDGMRIASEV 299

Query: 293 CTNRALQAQVGSAAESVKGGGTLASAFGSQPLLPELALQMIEVGEQAGELDSMLLKVADI 352
             N  ++A V  A   V+ G +L +A  +  L P + L MI  GE++G+L+ ML + AD 
Sbjct: 300 LQNVRVRAAVDDATARVREGTSLGAALTNTKLFPAMMLYMIASGEKSGQLEEMLERAADN 359

Query: 353 FDVEAKRGIDRLLAALVPSLTVVMAVLVAVIMLAIMLPLMSLTSNI 398
            D E +  +   L    P L V MA +V  I++AI+ P+++L + I
Sbjct: 360 QDREFESNVTLALGVFEPMLVVSMAGVVLFIVMAILQPILALNNLI 405