Pairwise Alignments

Query, 703 a.a., general secretion pathway protein GspD from Pseudomonas simiae WCS417

Subject, 466 a.a., PilQ2 pilus assembly protein from Sinorhizobium meliloti 1021

 Score = 98.6 bits (244), Expect = 6e-25
 Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 28/285 (9%)

Query: 402 AGTRITAQKSSNQLLVRTRPAQWKEIEAAIKRLDNPPLQVQIETRILEVKLTGELDLGVQ 461
           +G+   A  ++    + +R A  +E+  +IK   +   QVQ+  R +E+      +LG Q
Sbjct: 143 SGSATDAVAATQAEQIASRFAGDEEVINSIKITSSQ--QVQLNVRFVEINRDVGKELGTQ 200

Query: 462 ------WYLGRLAGNSSSTTVANASGSQGALGGGGAGLGATDSLFYSFVSSNLQVALHAL 515
                 W  G +  NSS    +N     G+L G   G G      YS     + VA+ AL
Sbjct: 201 ISAAYAWSNGSVEFNSSPRATSNTPA--GSLIGSLIGEG------YS-----VDVAIDAL 247

Query: 516 ETNGRTQVLSAPSLVVMNNQPAQIQVGDNIPINQTTVNTGDADTTLSSVEYVQTGVILDV 575
           E  G  + L+ P+L+  + + +    G   PI        + D T++ V Y + GV LD 
Sbjct: 248 EDRGMARRLAEPNLIARSGETSSFLAGGEFPIP-----ISEQDGTIT-VSYKKFGVGLDF 301

Query: 576 VPRINPGGLVYMDIQQQVSDAENQSTNSDTPVN-PRISTRSVSTQVAVQSGQTVLLGGLI 634
            P +   GL+ +DI+ +VS  +N ++     +  P  S R   T V ++SGQ+ ++ GL+
Sbjct: 302 TPTVLSDGLIALDIEPEVSAIDNTASYRVGNIAIPGFSVRRARTSVDLKSGQSFMIAGLL 361

Query: 635 KQDNQESVSAVPYLGKIPGLRWLFGSTSKSKDRTELIVLITPKVI 679
           + +N      VP LG++P L  LF S +  +  T+L++++TP ++
Sbjct: 362 QSENNLITQRVPGLGQLPILGALFSSKAYQRRETDLVIIVTPHLV 406