Pairwise Alignments

Query, 703 a.a., general secretion pathway protein GspD from Pseudomonas simiae WCS417

Subject, 660 a.a., type II secretion system protein GspD from Klebsiella michiganensis M5al

 Score =  163 bits (412), Expect = 3e-44
 Identities = 154/616 (25%), Positives = 276/616 (44%), Gaps = 62/616 (10%)

Query: 92  NFADQPIEAVINSVMGDLLHENYSIAQGVKGNVSFSTSKPVDKQQALSILETLLSWTDNA 151
           +F    I+  IN+V  +L ++   I   V+G ++  +   ++++Q      ++L     A
Sbjct: 33  SFKGTDIQEFINTVSKNL-NKTVIIDPSVRGTITVRSYDMLNEEQYYQFFLSVLDVYGFA 91

Query: 152 MIKQGDRYVILPANQAVAGKLVPQMNVAQPSSG--LSARLFALRYISATEMQKLLKPF-- 207
           +I   +  + +  ++      VP  + A P  G  +  R+  L  ++A ++  LL+    
Sbjct: 92  VINMNNGVLKVVRSKDAKTAAVPVASDAAPGIGDEVVTRVVPLTNVAARDLAPLLRQLND 151

Query: 208 -ARENAFLLVDPARNVLSLAGTPDELANYQDTIDTFDVDWLKGMSVGVFGLQRASVAELM 266
            A   + +  +P+ NVL + G    +      ++   VD     SV    L  AS A+++
Sbjct: 152 NAGVGSVVHYEPS-NVLLMTGRAAVIKRLLTIVER--VDNAGDRSVVTVPLSWASAADVV 208

Query: 267 PQLQSMFGPDSGMPLAGML--RFLPIERTNSVVAISSQPQYLSEVGDWIRTIDEGGGNEP 324
             +  +    S   L G +    +  ERTN+V+ +S +P     +   I+ +D     + 
Sbjct: 209 KLVTELNKDTSKSALPGSMVANVVADERTNAVL-VSGEPNSRQRIIAMIKQLDRQQATQG 267

Query: 325 QMYVYDVRNMKAADLAKYLRQIYGTGAIKDDTPAKVAPGLRTTTLSSLNSGGLQNNPPAA 384
              V  ++  KA+DL + L  I  T                           +Q+   AA
Sbjct: 268 NTKVIYLKYAKASDLVEVLTGISST---------------------------MQSEKQAA 300

Query: 385 EESEPQEKEVAPTSALEAGTRITAQKSSNQLLVRTRPAQWKEIEAAIKRLDNPPLQVQIE 444
           +          P +AL+    I A   +N L+V   P    ++E  I +LD    QV +E
Sbjct: 301 K----------PVAALDKNIIIKAHGQTNALIVTAAPDVMNDLERVIAQLDIRRPQVLVE 350

Query: 445 TRILEVKLTGELDLGVQWYLGRLAGNSS--------STTVANAS--GSQGALGGG-GAGL 493
             I EV+    L+LG+QW   + AG +         ST +A A+     G +     + L
Sbjct: 351 AIIAEVQDADGLNLGIQW-ANKNAGMTQFTNSGLPISTAIAGANQYNKDGTVSSSLASAL 409

Query: 494 GATDSLFYSFVSSNLQVALHALETNGRTQVLSAPSLVVMNNQPAQIQVGDNIPINQTTVN 553
            + + +   F   N  + L AL ++ +  +L+ PS+V ++N  A   VG  +P+  T   
Sbjct: 410 SSFNGIAAGFYQGNWAMLLTALSSSTKNDILATPSIVTLDNMEATFNVGQEVPV-LTGSQ 468

Query: 554 TGDADTTLSSVEYVQTGVILDVVPRINPGGLVYMDIQQQVSDAENQSTNSDTPVNPRIST 613
           T   D   ++VE    G+ L V P+IN G  V ++I+Q+VS   + ++++ + +    +T
Sbjct: 469 TTSGDNIFNTVERKTVGIKLKVKPQINEGDSVLLEIEQEVSSVADAASSTSSDLGATFNT 528

Query: 614 RSVSTQVAVQSGQTVLLGGLIKQDNQESVSAVPYLGKIPGLRWLFGSTSKSKDRTELIVL 673
           R+V+  V V SG+TV++GGL+ +   ++   VP LG IP +  LF STSK   +  L++ 
Sbjct: 529 RTVNNAVLVGSGETVVVGGLLDKSVSDTADKVPLLGDIPVIGALFRSTSKKVSKRNLMLF 588

Query: 674 ITPKVITSSGQARQVT 689
           I P VI    + RQ +
Sbjct: 589 IRPTVIRDRDEYRQAS 604