Pairwise Alignments

Query, 257 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 260 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Pseudomonas stutzeri RCH2

 Score =  221 bits (563), Expect = 1e-62
 Identities = 122/257 (47%), Positives = 165/257 (64%), Gaps = 2/257 (0%)

Query: 1   MRALFFIPVLSALSLVFAGCATPPENPQLLQARSLFSSLQEKPESNTLAAVETRIASNAL 60
           M  L  +P + ALS+    CA  P N  L +ARS FS+LQ    ++ +AA+ET+ ASN L
Sbjct: 1   MHKLVTLPTMLALSIGLVACANQP-NENLEEARSSFSALQSDSRASKVAALETQDASNML 59

Query: 61  DRANQVSLHDRTDPQIDQLAYLATQKIALAEQTIVGRKTDAQLDNIAVDRTQVQLDVRTA 120
           D+AN+  L+D     +DQLAYL  ++I LAEQTI  R  +  L   +  R + +L+ R A
Sbjct: 60  DKANKAYLNDADRETVDQLAYLTKRRIELAEQTIALRAAEDNLGKASAQRAEARLEARDA 119

Query: 121 QLKALQA-MKAQPTERGQVITFGDVLFDTGKADLKAGSQRDFQGLANFLVQNPERQVRVE 179
           Q++ LQ  M+A+ TERG ++TFGDVLFD  +A+LK G  R  Q LA+FL  N ER+V VE
Sbjct: 120 QIRKLQEDMQAKQTERGTLVTFGDVLFDLDRAELKPGGMRSVQKLADFLNDNAERKVIVE 179

Query: 180 GFTDSVGGDAYNQSLSERRAQAVARGLQRLGVGIERIAVIGYGKQFPVADNQSAQSRQLN 239
           G+TDS G   YNQ LSERRA +V   L ++GV  +RI   GYGK++PVA N  +  R +N
Sbjct: 180 GYTDSTGSAEYNQRLSERRANSVRAALVKMGVDPQRIVSQGYGKEYPVASNSDSAGRAMN 239

Query: 240 RRVEVIVSNDASAVSAR 256
           RRVEV +S+D   V+ R
Sbjct: 240 RRVEVTISDDNKPVAPR 256