Pairwise Alignments

Query, 237 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

 Score = 84.3 bits (207), Expect = 2e-21
 Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 21/215 (9%)

Query: 4   LLVDSLDVRYGTHIVFHKASLTVEAGSISGLLGPNGSGKTTFFDVLCGLKKMDGGAINNA 63
           L+   L  +Y    V  +  LT+EAG + GLLGPNG+GKTT F ++ GL + D G I   
Sbjct: 2   LVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELD 61

Query: 64  FSKL----------LYLSQIISTPPVFRMFDI---FKMTMLFCSDTKVTQQHALDKIEKW 110
              L          L +  +   P VFR   +    ++ +    D     Q      EK 
Sbjct: 62  GRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQ------EKE 115

Query: 111 SPGIAE--RYGEIWNKKSALCSYGEKRWFFTLSLLCASPDLVILDEPTAGVDPEFRYHIW 168
              + E  +   + ++  A  S GE+R       L A P +++LDEP AGVDP     I 
Sbjct: 116 LASLLEELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQ 175

Query: 169 RCLEGAAAGGVAVLVSSHNVDEIVAHCDDFYMLSQ 203
           R +      G+ VL++ HNV E +  CD  Y+L++
Sbjct: 176 RIVIHLKERGIGVLITDHNVRETLGICDRAYILAE 210