Pairwise Alignments

Query, 237 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 252 a.a., lipopolysaccharide export system ATP-binding protein LptB from Phaeobacter inhibens DSM 17395

 Score = 79.3 bits (194), Expect = 6e-20
 Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 8/208 (3%)

Query: 2   AGLLVDSLDVRYGTHIVFHKASLTVEAGSISGLLGPNGSGKTTFFDVLCGLKKMDGGAI- 60
           +GL ++ L   Y   +V    S++++ G +  LLGPNGSGKTT F  + GL   + G++ 
Sbjct: 13  SGLRIEKLRKSYSKKVVIRDVSMSLDRGEVVALLGPNGSGKTTSFYAIAGLVFPEAGSVT 72

Query: 61  ---NNAFSKLLYLSQIISTPPVFRMFDIFKMTML---FCSDTKVTQQHALDKIEKWSPGI 114
               NA +  +Y    +    + +   IF+   +     S   +  +HA  + E+    +
Sbjct: 73  IDGQNATTLPMYRRARMGIGYLPQEMSIFRGLSVEDNISSVLDIAVKHAHKRRERLEELL 132

Query: 115 AERYGEIWNKKSALC-SYGEKRWFFTLSLLCASPDLVILDEPTAGVDPEFRYHIWRCLEG 173
           ++   E   +  AL  S GE+R       L A P  ++LDEP AGVDP     I   +  
Sbjct: 133 SDFSIEHLRRAPALALSGGERRRVEIARCLAADPKYLLLDEPFAGVDPISVGDIRHLVGD 192

Query: 174 AAAGGVAVLVSSHNVDEIVAHCDDFYML 201
               G+ VL++ HNV E +   D  Y+L
Sbjct: 193 LKKRGIGVLITDHNVRETLEIVDRAYIL 220