Pairwise Alignments

Query, 820 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 856 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score = 87.0 bits (214), Expect = 4e-21
 Identities = 197/885 (22%), Positives = 337/885 (38%), Gaps = 126/885 (14%)

Query: 8   LRALLSHWRRHPVQFFSVLTGLWLATALLVGVQALNSQARDSYARASQ-LIGGEPQASL- 65
           LR  L   R     F+  +  + L    + GV ++ +   D  AR  + L+GG+   SL 
Sbjct: 18  LRYALREMRGGLNGFYVFIACIALGVMAIAGVGSVAASLGDGLAREGRTLLGGDAAFSLI 77

Query: 66  ---GTPDGASFAQDVFAQLRRAGWPVSPVVQGRVQLEGQPDVRLQLMGIDPVSLPGSGAV 122
               TP+  +F +       R    V+  ++G  + +      ++L  +D          
Sbjct: 78  QREATPNEVAFLRS------RGDVSVAATMRGMARTDDGRSALVELKAVDGAYPLLGDLK 131

Query: 123 AGQRLSQAQMLAFFDPPGRTWIAPQTLQALGLHEGQQPTTLSGHTLPPLQIQAD------ 176
               +  A +LA  D        P  L  L L  G + T  S        + A+      
Sbjct: 132 LEPPMPVADLLARRDDAFGAAADPALLARLDLKIGDKVTIGSATFQIRSAVAAEPDKLSG 191

Query: 177 ---MAPGLLLTDIGFAQPVLEMPGRLSRL------------------LVDKAFAAGQPTA 215
                P  L++D G     L  PG L R                   LVD   AA  P A
Sbjct: 192 NIGFGPRFLISDDGLRATQLLQPGSLVRWTYRVRLPDNGTDDRAAQRLVDDTRAA-LPQA 250

Query: 216 PAGLQLKQGEDNNLARLTESFHLNLDALGFLSFVVGLFIVHAAIGLALEQRRGLLRTLRA 275
              ++ +      L R    F   L  +G  + VVG   V  A+   +++RR ++ TL+A
Sbjct: 251 GWEIRTRGNASPQLERTITRFTQFLTLVGLAALVVGGVGVANAVKSHIDRRRDVIATLKA 310

Query: 276 CGVSVRMLIASLSVELGALSLLGGVLGVASGYLLASLLLPDVAASLRGLYG--AEVPGQL 333
            G + R + A    ++  L+L+G V+G+A G  +   L+        GL+G    +P   
Sbjct: 311 VGATGRDVFAIYLTQVIVLALIGAVIGLALGAAMPFALV--------GLFGQLLPLPVVA 362

Query: 334 NLSPWWWGAGLGLSLLGALLAGASSLWRAARLPLLALANAQAWHEAHGRWLRRQGWVASA 393
            L P      L   LL AL  G   L +   +P+  L    A  ++H   LR        
Sbjct: 363 ALHPGELALSLVYGLLTALAFGLWPLAQVRDVPVATLFREAATADSHRPRLRH------V 416

Query: 394 ALLIAVLALWLGNSLAAGFVLMAAL-LLGAALGLPVVLNGLLKAV------LGRSRSVLG 446
           AL+ AV+A+ L   +   +    AL ++GA L + V+L G+   +      L RSR  + 
Sbjct: 417 ALIAAVVAVLLAVVVGLAYDKRVALAVIGATLAIFVLLRGVAAGLMAIARRLPRSRITML 476

Query: 447 QWFLADCRQQLPALSLALMALLLALAANIGAGSMTSGFRYTFNNWLEQRLTAELYLNPQT 506
           +  +A+  +        +++L L LA  +    +    R  F+  L ++     +++  +
Sbjct: 477 RLAIANIHRPGALTPSVVLSLGLGLAVLVTVSQIDGNLRRQFSAALPEKAPTFFFIDIPS 536

Query: 507 PAQAQQLSTWLGQQPLVQTVLP--TWQVAVQLQGWPADLFGV-VDD--PTYRQHWPLLE- 560
            ++  Q  T+L Q      + P  T +    L+G      GV V+D  P     W L   
Sbjct: 537 -SETDQFGTFLRQ------IAPNATLEDVPMLRGRIVAARGVRVEDLKPAPDAEWVLQSD 589

Query: 561 -----AANKP----------WDQLQQGDTLM-LSEQLARRLNVRLGDSVNIATPQGVWAP 604
                AA+ P          W +   G  L+   ++LA+ L + +GD V +     V   
Sbjct: 590 RGLTYAADIPAGSKVVEGRWWPKDYSGPPLVSFDKKLAQGLGLSIGDKVTV----NVLGR 645

Query: 605 KVVGVYADYGNPKGHMLVNSTHLL-----------THWPTLSPARFNLRVAPENVAPLVR 653
           ++    ++  +     L  +  L+           TH  TL+ +       P++ A +++
Sbjct: 646 EITATISNLRSIDWQSLGINFVLVFSPDTFRGAPHTHIATLTES----GSTPQSDAAVIK 701

Query: 654 EVQRAFALDDS-RIIDQQQLKGWSSQVFERTFAATAALNSLTLGVAGVALFISLLTQSQS 712
           +V   F +  S R+ +  +  G    V      A    +++TL  A + L  +L    + 
Sbjct: 702 QVADRFPMVTSVRVREALETVG---GVVSNLVLAVRGASAVTLISAILVLGGALAAGHRH 758

Query: 713 RLGQLAPLWALGVTRRQLMLLNLGQTWLLAVLTLILALPLGLLLAWCLDAVINVQAFGWR 772
           R+     L  LG TR +L+     +  L+ + T   A+  G   AW +           R
Sbjct: 759 RVYDAVILKTLGATRARLIGAFALEYALIGLATAAFAVLAGSAAAWLIVT---------R 809

Query: 773 LPLQVFPWQLAQLLGLAMLATLLASAWPL---WQLYRSRPADLLR 814
           L    F WQ     G+ + A ++     L   W     +PA +LR
Sbjct: 810 LMTLSFAWQAGSAAGVVVAALVVTVGLGLIGTWLALNQKPASVLR 854