Pairwise Alignments

Query, 311 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 337 a.a., Substrate-binding region of ABC-type glycine betaine transport system from Pseudomonas syringae pv. syringae B728a

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 73/320 (22%), Positives = 129/320 (40%), Gaps = 41/320 (12%)

Query: 7   TLTAAALLSAHAMAAEPASCKNIRMGVVSW-TDVVATSGMADVLLNGLGYDSKQTSAVQQ 65
           +L A  LL   A AAE A  K I+ G ++W +  + T  +  ++  G GY +        
Sbjct: 11  SLLALGLLGQTATAAEKA--KPIQFGALTWESGSLITEVLRTIVEKGYGYPTDTLPGSTV 68

Query: 66  IIFAGIRDKRLDIFLGYWKPAMDNNIAPFLAAKQVKVFDTPSLAD-AQATLAVPQYV--A 122
            +   +    + +    W       +    A ++ KV    ++   A     VP+YV   
Sbjct: 69  SLETALAKNDIQVIAEEWTGRSPVWVK---AEEEGKVLGLGNIVKGATEGWWVPEYVIKG 125

Query: 123 DAG---------LKTFADIARFKD-----KLGGKIYGIEPGSGANTDIQKMIDTNRFGLG 168
           DA          LK+ AD+AR+KD     +   K   +   SG  ++I        +GL 
Sbjct: 126 DAAKGIKPLAPDLKSVADLARYKDVFKDPESPDKGRFLNSPSGWTSEIVNTQKLKAYGLA 185

Query: 169 -GFKLVASGEAGML-AAVQRAVNRKEFVVFVGWTPHPMNINMKMAYL------------- 213
             F    +G    L A V  A+ R + V+F  W+P P+    K+  L             
Sbjct: 186 DSFVNFRTGSGAALDAEVASAIRRGKPVLFYYWSPTPLLGKYKLIKLDEPAFDAEAWKTL 245

Query: 214 --TGSEDVFGPDEGRATVSTVTAPDFAQRCPNANRVLENLTFTAAQESQLMVPIMER-ES 270
               + +  G     AT+S   + +F+++ P    V + + F     ++ +  + ++ E 
Sbjct: 246 TDASNPNPRGTSSLAATLSIGVSAEFSKQYPELVSVFKGVDFPIDLLNKTLGEMSDKHED 305

Query: 271 PQDVARQWLRDHPEDLQRWL 290
            + VA ++L+ HPE  + WL
Sbjct: 306 AKVVAARFLKQHPEVWKAWL 325