Pairwise Alignments

Query, 311 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 314 a.a., amino acid-binding periplasmic protein from Sinorhizobium meliloti 1021

 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 73/315 (23%), Positives = 128/315 (40%), Gaps = 43/315 (13%)

Query: 8   LTAAALLSAHAMAAEPASCKNIRMGVVSWTDVVATSGMADVLLNGLGYDSKQTSAVQQI- 66
           L AAAL  A    A PA+  ++ + +  W    A    A++L  G+       + V+++ 
Sbjct: 8   LCAAALALA---VAAPAAAADLVIAMPPWPSGQAA---ANILKLGIAKKFSLEAEVRELG 61

Query: 67  ---IFAGIRDKRLDIFLGYWKPAMDNNIAPFLAAKQVKVFDTPSLADAQATLAVPQYVAD 123
               F G+    +DI    W+P  D  +  F+  K V      ++   Q   A P+  A 
Sbjct: 62  TLTAFIGLEKGEVDIQPEVWRPNFDELVRKFVTEKGVVTLSERAVPAWQGICATPE--AA 119

Query: 124 AGLKTFADI---ARFK----DKLGGKIYGIEPGSGANTDIQKMIDTNRFGLGGFKLVASG 176
           A +K+ AD+   A+ K    D  G     I      +T I++             LV + 
Sbjct: 120 ATIKSVADLGDPAKTKILDTDGDGRGEMWIGAAEWLSTGIERARAAGYGYAANLTLVEAK 179

Query: 177 EAGMLAAVQRAVNRKEFVVFVGWTPHPM---------------NINMKMA------YLTG 215
           E   +AAV  A+     +VF  + PH +                   K+A      +++ 
Sbjct: 180 EEVAMAAVDAAIATARPMVFYCYAPHHVFKLHQISRLEEPPHDPAKWKIAPPNDPLWVSK 239

Query: 216 SEDVFGPDEGRATVSTVTAPDFAQRCPNANRVLENLTFTAAQESQLMVPI-MERESPQDV 274
           S      D G+  +   TA  FA++ P   + L+ + F+  + + +   + +ER++P D 
Sbjct: 240 SSAATAWDAGQFQIGYATA--FAKKHPEVAQFLQKVDFSPDEVTAMSYALEVERQAPADY 297

Query: 275 ARQWLRDHPEDLQRW 289
           AR+W+  H E +  W
Sbjct: 298 ARKWVESHAERIDGW 312