Pairwise Alignments

Query, 311 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  110 bits (275), Expect = 4e-29
 Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 8/262 (3%)

Query: 29  IRMGVVSWTDVVATSGMADVLLNGLGYDSKQTSAVQQIIFAGIRDKRLDIFLGYWKPAMD 88
           I+ G+  W  V   S +  V+L   GY+ +       I +A + D  LD+ L  W P   
Sbjct: 36  IKFGLPPWPGVTVKSNVVKVILEEQGYNVELNQLDAGITYAKLADGDLDVSLAGWLPTTH 95

Query: 89  NNIAPFLAAKQVKVFDTPSLADAQATLAVPQYVADAGLKTFADIARFKDKLGGKIYGIEP 148
                    +   V    ++      LAVP Y  +AG+++  D+   ++   GKI GIEP
Sbjct: 96  EEYWTQYGNQLEMVH--VNVGKTALGLAVPTYTYEAGIQSITDLNGNEELFDGKIIGIEP 153

Query: 149 GSGANTDIQKMIDTNRFGLGGFKLVASGEAGMLAAVQRAVNRKEFVVFVGWTPHPMNINM 208
           G+G  ++ +K ID+  + L G++L +S    M+A + RA+N  E +V   W PH +    
Sbjct: 154 GAGIMSNTEKAIDS--YSLSGYELQSSSTPAMMAELARAINEDENIVVTVWEPHSVFFKF 211

Query: 209 KMAYLTGSEDVFGPDEGRATVSTVTAPDFAQRCPNANRVLENLTFTAAQESQLMVPIM-E 267
            +  L   E V+G  +    V T+   DF    P      +      + +S+ +     E
Sbjct: 212 DIKMLDDPEKVYGDGD---KVYTIARTDFKDDYPEVYEFFQKFEVDPSVQSEWIYKYSDE 268

Query: 268 RESPQDVARQWLRDHPEDLQRW 289
              P++VA +W+ ++PE ++ W
Sbjct: 269 GMDPEEVAEEWVANNPELVENW 290