Pairwise Alignments

Query, 353 a.a., iron ABC transporter permease from Pseudomonas simiae WCS417

Subject, 412 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  266 bits (680), Expect = 7e-76
 Identities = 152/407 (37%), Positives = 215/407 (52%), Gaps = 60/407 (14%)

Query: 1   MKIKCLLWTFLLLAACDKVPAPQESFAGLG------------SDAADFAQVVPGKVFSFP 48
           + +  LL   L+L  CD   AP+    G+G            ++ + + +V+PGK  SFP
Sbjct: 12  LMLTTLLLPSLMLLGCD---APKPESKGMGDLMGSGEGTDTDAEQSGYTKVIPGKPLSFP 68

Query: 49  EDHGPHAGFRIEWWYVTANLRDEQGNVFGVQWTLFRNAL-------------KAGPT--- 92
           +DH  H  FR EWWY+TANL  + G   G+QWT FR AL             K  PT   
Sbjct: 69  KDHLAHDDFRQEWWYLTANLTTDTGEPLGLQWTQFRIALSPSALESPESPGTKESPTSET 128

Query: 93  ------------------QAGWRDSTIWLGHAAVTSATQHYAAERYARGGVGQAGAQAKP 134
                             +  W    +++ H+AVT++  H A+ER++R     AG +A P
Sbjct: 129 PKPEKLKPEKPKPEKLKPETSWATKQLYMAHSAVTTSEIHKASERWSRAHPKLAGTKASP 188

Query: 135 FNAWIDDWNFVSRPGAASSLADMQLKASGAQFAYDLHLTSSRPLVLQGDNGYSRKSDLGQ 194
            +  +DDW + S       L    L  +   F+Y L L+S  P   QGD GYS KS  G+
Sbjct: 189 LSIALDDWRWQSE---GDDLFPATLTVNSDDFSYQLTLSSRAPYQRQGDEGYSIKSADGE 245

Query: 195 -ASYYYSQPFFSASGSVTLDGKVYQVTGPAWLDREWSSQPLSASQTGWDWFSLHLDRGEQ 253
            ASYYYSQPF + +GSVTL+GKV+ V+G  WLDREWSSQ L+  Q GWDWF+L LD    
Sbjct: 246 VASYYYSQPFIAITGSVTLNGKVHSVSGQGWLDREWSSQFLTRQQQGWDWFALRLDDAST 305

Query: 254 LMLFRVR----QTNGTGYLTGTWIDAQGQTQTLHNADIQLVPLETSTIDGRKIPTRWSLK 309
           LMLF++R     +    + +   + A G  + + ++ I++   E   IDG   P  W + 
Sbjct: 306 LMLFQLRSQPLSSQDRPFFSARRMFADGSGRNIASSGIRMKATEWQKIDGANYPIAWQIA 365

Query: 310 IPAKQLDITTQAVNPNAWMNLSIPYWEGPVQFEG---GVGYLEMTGY 353
           IP +QL++    +NP++ M LS+ YWEGP+Q  G   G GY+E+TGY
Sbjct: 366 IPGEQLNLNISPLNPDSLMPLSVRYWEGPIQVSGSHRGQGYMELTGY 412