Pairwise Alignments

Query, 502 a.a., ribonucleotide-diphosphate reductase subunit alpha from Pseudomonas simiae WCS417

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  393 bits (1010), Expect = e-114
 Identities = 222/495 (44%), Positives = 315/495 (63%), Gaps = 7/495 (1%)

Query: 3   SLLKLENICKRYPGVQALKSINLQVERGEIHALLGENGAGKSTLMKILGGVEHQDEGQIL 62
           ++L L  I K +PGV+AL   +L V  G + AL+GENGAGKSTLMK+L G+  +D G I 
Sbjct: 4   AILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIE 63

Query: 63  IDGQAQQFATYRDAIAAGIGIVFQEFSLIPYLTAVENIFLGHELSNRFGLLRKREMVEAS 122
             GQ   F   RD+  AGI I+ QE +LIP LT  ENIFLG E+++ FG +   EM   +
Sbjct: 64  YQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKA 123

Query: 123 EALFKRLGVTIDLQCAVKHLSVAEQQFVEIAKALALDARLLVLDEPTATLTPSEAELLFE 182
           + L  RL V    +  +  LS+ EQQ VEIAKAL+ +++++++DEPT  LT +E E LF 
Sbjct: 124 DQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFN 183

Query: 183 IMRELKRQGVAVIFISHHLEEIFQVCDRISVLRDGGNVGVTDVADSDIDHLVEMMVGRRL 242
           ++ EL+ QG  +++ISH L+EIF++CD I+VLRDG  +G   V D++ D L+EMMVGR+L
Sbjct: 184 VINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKL 243

Query: 243 ACSFPPKPTRERGPLLLEVKDIQLVRNGPHN-RFQLHKGEILGFAGLVGSGRTELALGMM 301
              + P+   ++G + LEV  I L  +G H+  F L KGEILG +GL+G+GRTEL   + 
Sbjct: 244 EEQY-PRIAAQQGDISLEV--IGLTGSGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIY 300

Query: 302 GALPSVSKDVWLRGEKITLDDPAQALAHGIGLLPESRKSEGLITDFSIRENISLNNLPKY 361
           GALPS    + L G  +    P   LA+GI  + E RK +GL+   S++EN+SL  L   
Sbjct: 301 GALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALD-- 358

Query: 362 QNASGL-IDKNRECASVEGLMKQLSIKAPSSESRVFNLSGGNQQKVVIARWINHHCDVLV 420
           Q + G+ I    E  +V+  ++  +IK PS E  + NLSGGNQQKV IA+ +     VL+
Sbjct: 359 QLSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLI 418

Query: 421 FDEPTRGIDVGAKAQIYALMRSLTEQGYAIIMISSELPEIIGMCDRVAVFHKGAIVKLLE 480
            DEPTRG+DVGAK +IY L+     +G +II++SSE+PE++GM DR+ V H+G I     
Sbjct: 419 LDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFM 478

Query: 481 ASAVNPQEVMRHATG 495
           AS  + +++M  A G
Sbjct: 479 ASEADQEKLMACAVG 493



 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 59/226 (26%), Positives = 117/226 (51%), Gaps = 5/226 (2%)

Query: 23  INLQVERGEIHALLGENGAGKSTLMKILGGVEHQDEGQILIDGQAQQFATYRDAIAAGIG 82
           ++  +++GEI  + G  GAG++ LMK++ G    + G I ++G+     + +D +A GI 
Sbjct: 272 VSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGIA 331

Query: 83  IVFQEFS---LIPYLTAVENIFLG--HELSNRFGLLRKREMVEASEALFKRLGVTIDLQC 137
            + ++     L+  L+  EN+ L    +LS    +    E++   + +      T   + 
Sbjct: 332 YISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSREQ 391

Query: 138 AVKHLSVAEQQFVEIAKALALDARLLVLDEPTATLTPSEAELLFEIMRELKRQGVAVIFI 197
            + +LS   QQ V IAK L    ++L+LDEPT  +     + +++++ + K +G+++I +
Sbjct: 392 IIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILV 451

Query: 198 SHHLEEIFQVCDRISVLRDGGNVGVTDVADSDIDHLVEMMVGRRLA 243
           S  + E+  + DRI V+ +G   G    +++D + L+   VGR  A
Sbjct: 452 SSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVGRNPA 497