Pairwise Alignments

Query, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 340 a.a., m-Inositol ABC transporter, permease component (iatP) (from data) from Pseudomonas fluorescens FW300-N2E3

 Score =  225 bits (573), Expect = 1e-63
 Identities = 126/308 (40%), Positives = 189/308 (61%), Gaps = 18/308 (5%)

Query: 36  VGLVVVTLVMILASDTFLTASN-LSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMAL 94
           +GLV      I+   +FL  S  L  +  QVSI  ++A+G+T VI+T GIDLS G V+AL
Sbjct: 33  IGLVFEMFGWIVRDQSFLMNSQRLVLMILQVSIIGLLAIGVTQVIITTGIDLSSGSVLAL 92

Query: 95  SGTLTAGLM------------VAGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVT 142
           S  + A L             +  LP  + + AG+ +G+  G  NG  +A   +PP I T
Sbjct: 93  SAMIAASLAQTSDFARAVFPSLTDLPVWIPVIAGLGVGLLAGAINGSIIAVTGIPPFIAT 152

Query: 143 LATMGIARGLGLMYTDGYPISGLPDWFAFFGRESLFGIQVPILIMLLTYLVAYVLLQHTR 202
           L  M  ARGL   YT+G P+S L D +   G  ++     P++I L+  ++ ++ L++T+
Sbjct: 153 LGMMVSARGLARYYTEGQPVSMLSDSYTAIGHGAM-----PVIIFLVVAVIFHIALRYTK 207

Query: 203 IGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVSFE 262
            G+Y YAIGGN +A R SG+   R  ++VY I+GL A +AG+V ++R  +GQ   G+S+E
Sbjct: 208 YGKYTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGLAGVVASARAATGQAGMGMSYE 267

Query: 263 LDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILLAI 322
           LDAIAA V+GG S+AGG G I GT++GA++LGV+ +G   +GV  Y+Q +IKG II++A+
Sbjct: 268 LDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFTFVGVDAYIQDIIKGLIIVIAV 327

Query: 323 FISRQRHK 330
            I + R+K
Sbjct: 328 VIDQYRNK 335