Pairwise Alignments

Query, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 323 a.a., ribose ABC transporter permease from Rahnella sp. WP5

 Score =  275 bits (703), Expect = 1e-78
 Identities = 142/299 (47%), Positives = 203/299 (67%), Gaps = 4/299 (1%)

Query: 36  VGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMALS 95
           + L+V+  V+   S  F T +NL NI +Q S+NAI+AVGMT VILT GIDLSVG ++AL+
Sbjct: 25  IALLVLIAVVSSMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALT 84

Query: 96  GTLTAGLMVAGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVTLATMGIARGLGLM 155
           G + A ++   +   +A+ A + +G A G   G+ VA   +   I TL  M + RG+ ++
Sbjct: 85  GAVAASIVGLEVNAFVAVCAALALGAAVGGVTGMIVAKGKVQAFIATLVMMLLLRGITMV 144

Query: 156 YTDGYPIS----GLPDWFAFFGRESLFGIQVPILIMLLTYLVAYVLLQHTRIGRYIYAIG 211
           YT+G PIS     + D F +FG     GI  P+ +M + ++ A+ +L HTR+GRYIYA+G
Sbjct: 145 YTNGSPISTGFNDVADVFGWFGIGRPLGIPTPVWLMAVVFIAAWYMLHHTRLGRYIYALG 204

Query: 212 GNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVSFELDAIAAVVL 271
           GNE A RLSG+   + K++VY + GL AA+A ++  +RL S QPNAG  +ELDAIAAVVL
Sbjct: 205 GNESATRLSGISVDKVKIIVYSLCGLLAALASIIEVARLSSAQPNAGTGYELDAIAAVVL 264

Query: 272 GGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILLAIFISRQRHK 330
           GG S++GG+G IVGTL+GA++LG LNNGLN+LGVS Y Q ++K  +ILLA+ +  + +K
Sbjct: 265 GGTSLSGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKSNK 323