Pairwise Alignments

Query, 334 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (276), Expect = 4e-29
 Identities = 85/320 (26%), Positives = 149/320 (46%), Gaps = 17/320 (5%)

Query: 2   NKKKSVTISDIAKRVGMTTITVSRALSKPDLVKPATLARILEVAREMDYVPNAFARGLKR 61
           ++K +VT  D+AK  G++  TVSR       V   T  ++ E A+ ++Y PNAFAR L  
Sbjct: 10  SEKATVTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTT 69

Query: 62  SESLIIGVITASVDNPFYSEMIKAISREAKQHGYTIMLVDTDELEELESKAVDTLLGYRV 121
           +ES +IG++    D P + + ++ IS E +Q GY+ +L+   +++E ++ ++  +  YRV
Sbjct: 70  NESKLIGLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPW-QVDEQDNHSIPNIFQYRV 128

Query: 122 AGIILSPVSDEPSYQPDYLERLANGKTPVVLLDRTIHDSPFSRVVLDNYHSGIQAAHYLL 181
            G+I +      ++     E       P+V   R +  +  S V+ DNY +G QAA  LL
Sbjct: 129 DGVIAA----SATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQ-LL 183

Query: 182 RQTPNLKRLLVLTGPEHSRITVERLKG----LREVLAEHPQVEVAVQAGDYTLMPSYLHT 237
            Q    +  + LTG   +    ER +G     + +    P V  A    DYT     +  
Sbjct: 184 HQA-GAQSAVYLTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKATY--DYTGSLDTIRR 240

Query: 238 LDYLAEHSAPDAIMGFNQLITLGALRALRMHNIAH--DSLTICGIDRLPFADIFGVPIAC 295
           L  +A+ S P AI      + +  +   R        D + + G D +P  +     +  
Sbjct: 241 L--IADSSRPAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTT 298

Query: 296 VAHDASLAGSSAVRLLLDRL 315
            A D       +V++++D++
Sbjct: 299 FAQDFKRLARESVKIIVDQI 318