Pairwise Alignments

Query, 334 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  120 bits (300), Expect = 6e-32
 Identities = 87/311 (27%), Positives = 150/311 (48%), Gaps = 9/311 (2%)

Query: 8   TISDIAKRVGMTTITVSRALSKPDLVKPATLARILEVAREMDYVPNAFARGLKRSESLII 67
           T+ D+A+  G++T TVSRAL  P+ V  +T  R+ E   E  Y PN+ AR L+R+ES  I
Sbjct: 3   TMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTI 62

Query: 68  GVITASVDNPFYSEMIKAISREAKQHGYTIMLVDTDELEELESKAVDTLLGYRVAGIILS 127
             I   + +P++SE+I+ I   A +HGY ++L D+ + +  E+  V+ +   +  G++L 
Sbjct: 63  VAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLL 122

Query: 128 PVSDEPSYQPDYLERLANGKTPVVLLDRTIHDSPFSRVVLDNYHSGIQAAHYLLRQTPNL 187
             +D P    D  +       P+V+      +     V +DN  S  +A +YL +     
Sbjct: 123 G-TDLPF---DVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQL--GH 176

Query: 188 KRLLVLTGPEHSRITVERLKGLREVL--AEHPQVEVAVQAGDYTLMPSYLHTLDYLAEHS 245
           KR+  ++GP+H+ +   R +G ++ L  A           GD+T           LA   
Sbjct: 177 KRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPE 236

Query: 246 APDAIMGFNQLITLGALR-ALRMHNIAHDSLTICGIDRLPFADIFGVPIACVAHDASLAG 304
            P AI   N  + +GA++ A R+       L++ G D + FA     P+  ++      G
Sbjct: 237 QPTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIG 296

Query: 305 SSAVRLLLDRL 315
             A+ ++L+ L
Sbjct: 297 RQAMLMMLELL 307