Pairwise Alignments

Query, 287 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 306 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (345), Expect = 3e-37
 Identities = 87/265 (32%), Positives = 130/265 (49%), Gaps = 6/265 (2%)

Query: 1   MDIELARTFLEITRCGSLAAAAEKLHVTQTAITARVKSLESQLGSTLFVRNRAGARLTAD 60
           MD+++ RTFLE+ +      AAE L++TQ A++AR+K LE+   + LF R+R   +LT+ 
Sbjct: 13  MDVKVFRTFLELAKVRHFGRAAENLYLTQAAVSARIKQLENHFDAQLFTRDRNNIKLTSA 72

Query: 61  GEAFVVYANQLLQTWEAAKRDLPLPDGYRNVLHIGGEVSLCNPLMLGWAQALRQHLPGHA 120
           GE  V YA  ++ T + AK +L L  G    L +GG  ++ +  +      +     G+ 
Sbjct: 73  GERLVGYAEVMVATLQQAKFELSLESGKALQLTLGGTPNIWDAYLQHCLSRITDTFEGYG 132

Query: 121 LRTEVREGEYLLRQLELGVLDAALVFQPQYWPGLQVEQVLEEKLILVQLVSNPAP----- 175
              EV   E L R L    LD A    P     LQ ++V +  L+LV    + A      
Sbjct: 133 FLAEVMGREQLNRGLLERTLDMAFALDPIKAEELQCKKVADLVLVLVSTKPDDADSVFEN 192

Query: 176 -YVYIDWGPGFRQQHDAALPDKARAALSFNLGPLALQYILENGGAGYFRTRVVQSYLDNG 234
            YVY+DWG  F  +H    P      L  +   +AL +ILE GG+ Y    +VQ  LD G
Sbjct: 193 RYVYVDWGARFASEHADRHPKAPAPFLRTSTARIALDFILEKGGSAYLPQTMVQPLLDAG 252

Query: 235 VMQRVPKAPEFSFPTYLVYSRARDS 259
            + RV +  ++  P YL Y +   S
Sbjct: 253 QLHRVSEVNDWQRPLYLSYRKNSSS 277