Pairwise Alignments

Query, 422 a.a., allantoate amidohydrolase from Pseudomonas simiae WCS417

Subject, 382 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella amazonensis SB2B

 Score = 45.4 bits (106), Expect = 3e-09
 Identities = 85/397 (21%), Positives = 151/397 (38%), Gaps = 71/397 (17%)

Query: 38  VCRLALTDLDRQARDLFVQWCEAAGCSVS---VDAIGNIFARRAGRNPALPPVMTGSHID 94
           + R ++T LD   +DL  +   A G ++     +   N++ARR    P         H D
Sbjct: 18  ISRPSVTPLDEGCQDLMAKRLAAIGFTIEPMVFEDTTNLWARRGTEGPVF---CFAGHTD 74

Query: 95  TQPTGGKFDGCYGVMAGLEVIRTLNDLNIETAAPIEVVVWTNEEGSRFPPCMMGS----G 150
             P G                    DLN     P + VV       R    M GS     
Sbjct: 75  VVPVG--------------------DLNRWHTPPFDPVVIDGYIHGRGAADMKGSLAAMV 114

Query: 151 VFAGKF-----DLQDTLDKL---DDQGLSVGAELQRIGYAGSR------AVLGHPVGAYF 196
           V A +F     D Q ++  L   D++G  +   ++ +    +R      A++G P   + 
Sbjct: 115 VAAERFVAEHPDHQGSIAFLITSDEEGPFINGTVRVVETLEARHEKITWALVGEPSSTHL 174

Query: 197 EAHIEQGPVLEDQATTIGVVMGCLGQKWFDLTLTGVEAHAGPTPMHLRKDALVGAAEVVS 256
              +              V  G  G    +LT+ G++ H      HL  + +  AA  ++
Sbjct: 175 LGDV--------------VKNGRRGSLTGNLTVKGIQGHVAYP--HLADNPIHRAAPALA 218

Query: 257 AVNRI----AHQQQPHACGTVGCLSLHPGSRNVIPGQVHMTIDLRHLHADKLQAMVDEVR 312
            ++RI     ++  P     +  ++   G+ NVIPG++ +  + R+      + ++  V 
Sbjct: 219 ELSRIEWDKGNEFFPPTSFQIANINGGTGASNVIPGELKVMFNFRYSTEVTAETLIARVL 278

Query: 313 GVIEDTARRHGLTFELTPTAD-FPPLDFNPVCVNAVRDAAAVLGLSHMD-IVSGAGHDAI 370
           G+++     HGL +++    +  P L      ++A R+A   +  +H D   +G   D  
Sbjct: 279 GILD----AHGLDYDIDWVFNGLPFLTGEGPLLDATREAIFEVTGTHTDPQTTGGTSDGR 334

Query: 371 FVAELGPAGMIFVPCEGGISH-NEIENAAPDDLAAGC 406
           F+A  G   +   P    I   NE   A+  +L  GC
Sbjct: 335 FIAPTGAQVIELGPVNATIHKVNECVKASDLELLTGC 371