Pairwise Alignments

Query, 249 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 255 a.a., branched-chain amino acid ABC transporter, ATP binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  164 bits (416), Expect = 1e-45
 Identities = 95/249 (38%), Positives = 146/249 (58%), Gaps = 7/249 (2%)

Query: 4   LLETKDLELAYGAFHAVNGVNLKVEAGTIHTIIGPNGAGKTSLFHCLTGERQATAGAIHF 63
           LL  ++L   +G   AVN V+  V+ G+I  +IGPNGAGKT++F+ +TG  +  +G I F
Sbjct: 3   LLSLRNLTKTFGGLVAVNSVSFDVDEGSIVGLIGPNGAGKTTVFNLITGNYKPDSGDIFF 62

Query: 64  DGKNLMRKPAHGRVGLGMARSFQLTSLFQNLSVRENLRLAAQGRDGARALNFW-----RR 118
           DG+ +     H  V +G+AR+FQ   LFQN+SV EN+      R  A   +        R
Sbjct: 63  DGRAIKGLLTHRIVQMGIARTFQTIRLFQNMSVMENVLAGCHCRMTAGVFSAMLGTAGHR 122

Query: 119 VDSKREHLEMADQVLERLQLTARADTLAGELSHGQQRVLEVGMSICSKPKLLMLDEPTSG 178
            + KR  +E A + LE + L  + D LA  LS+G QR+LE+  ++ + P+ ++LDEP  G
Sbjct: 123 REEKRA-IERAVRELEFVGLADQHDNLAKNLSYGNQRLLEIARALATDPRFIILDEPAGG 181

Query: 179 MGIDDIPIMTQLISDL-GRDHTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEFVRAD 237
           M   +   +   I  +  R  +VLLIEH+MS+VM + +++ V+ +G ++ EGTP  ++ D
Sbjct: 182 MNDQETAALIGTIRAIRDRGISVLLIEHDMSLVMKVCEKLVVLEYGALIAEGTPSVIKRD 241

Query: 238 ERVRTAYLG 246
            RV  AYLG
Sbjct: 242 PRVIEAYLG 250