Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 400 a.a., D-lactate transporter, permease component 1 (from data) from Phaeobacter inhibens DSM 17395

 Score =  155 bits (393), Expect = 1e-42
 Identities = 117/390 (30%), Positives = 185/390 (47%), Gaps = 72/390 (18%)

Query: 13  QSKAMLLWVLAVLIGLPLIL---PSAT-----------LATEILIFAMAALACNLLLGYT 58
           + K +LL V  + +  P IL   P+ +           L    +IF + A+  N+L G T
Sbjct: 7   KDKTLLLVVAILTLFAPFILNPFPTGSALAQFNAGYPDLMQRFVIFGIFAIGFNILFGLT 66

Query: 59  GLLSFGQGIFFGAGAYCAALLMIHLQLGLFTALLGAAIAGGFLALLVGALAIRRTGIYFV 118
           G LSFG   F G G+Y A  +   L + +  A++ + I  G  AL++G +++RR+GIYF 
Sbjct: 67  GYLSFGHAAFLGVGSYSAVWMFKLLSMNVVPAIVLSVIVAGLFALVIGYVSLRRSGIYFS 126

Query: 119 MLTLAFSQMAYFVAYT-LSDWTGGDNGL-LSVPRPEI---------RLGETVLLSLADAR 167
           +LTLAF+QM++ +AY+ L+  T G+ GL L++  P +          +  T L  L    
Sbjct: 127 ILTLAFAQMSFNLAYSVLTPITNGETGLQLTLDDPRVLGVSATADGSIPVTSLFGLEMRS 186

Query: 168 AF--------------YAFVAVLFLLIFIGARRVIASPFGSTLMAIRENETRASAIGYDT 213
            F              Y   A++ L  F  + R+  SPFG  L A++ N+ R +  G +T
Sbjct: 187 TFEMVVGPWAFQFNAGYYLCALILLAAFYLSIRIFRSPFGLMLKAVKSNQQRMNYTGLNT 246

Query: 214 RHFKILVFVLSGAVTGIAGALYAMLLHFVPLSNIDLMMSENILIMTIVGGTGSLFGSLLG 273
           R + +  FV+SG   G+AG L A +        +    S  +++MTI+GG G+L G +LG
Sbjct: 247 RPYTLAAFVISGMYAGLAGGLMASMDPLAGAERMQWTASGEVVLMTILGGAGTLIGPVLG 306

Query: 274 AGSIVLLGDFLSDL-------W---------------------PRWLMLLGVILILVVIF 305
           AG I    +  S +       W                       W + LG++ +LVVIF
Sbjct: 307 AGFIKYFENIFSKINDNVLHSWFSFMPDGIEDAMVFIVHPFIGKGWHLTLGILFMLVVIF 366

Query: 306 MRGGLWGGLVSLFERVRGSRKTAAVAKEEG 335
           + GGL  G   L   ++G +     AK++G
Sbjct: 367 LPGGLVEGGQKLRGWIQGRK-----AKKDG 391