Pairwise Alignments

Query, 286 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 305 a.a., Urea ABC transporter, permease protein UrtB from Pseudomonas fluorescens FW300-N2E2

 Score =  147 bits (371), Expect = 3e-40
 Identities = 91/287 (31%), Positives = 151/287 (52%), Gaps = 12/287 (4%)

Query: 8   QILNGLGLGMIYFLISVGLTIIFGLLNFVNFAHGAFFLLGAYICYTAVSLTGNF------ 61
           Q  NGL +  +  L+++GL IIFG +  +N AHG F  +GAY  Y   SLT +F      
Sbjct: 14  QGFNGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTIGAYTTYVCSSLTSHFAPWFQP 73

Query: 62  ---WLALLIAPLVVAALAWVIERVLIQRIYHLPHMFQILVTLGIALIIQEASVMIWGPVG 118
              ++A+ ++ LV  A+ W++E  +I R+Y  P +  +L T G++L++Q+    ++G   
Sbjct: 74  YYFFIAIALSFLVAGAIGWLVEWAMISRLYKRP-LDTLLATWGLSLVMQQTFRSVFGARE 132

Query: 119 KSVAVPELLRGVLVVGDFV-YPYYRLFLIVFSGLVGLGLWLLLERTRFGALVRAGSESTE 177
            S   PE L G     + +  P   LF++  + L+   ++LLL R+R+G  VRA  ++  
Sbjct: 133 VSATPPEWLMGSFNFTESIEIPRNGLFMMALTLLLTAAIFLLLYRSRWGLQVRATVQNRL 192

Query: 178 TVSLLGTNIFRLFSMTFALGVALAGVAGVLFAPLRGAQPFVGPEILGVAFVVVVIGGMGS 237
               +G N  ++  MTFALG  +AGVAG  F  +    P  G + +   F+VVV GG  S
Sbjct: 193 MSRAVGINTRKVDRMTFALGCGVAGVAGAAFTTIGSTGPTAGSQYIVDTFLVVVFGGAQS 252

Query: 238 FSGALVGGLLVGVVQSLMT-TLWPQGASLMIYGAMAVVILVRPYGLF 283
             G +    ++   QS+    L    A ++    + +++++RP GLF
Sbjct: 253 LFGTIASAFVIAQTQSISEFFLSGSMAKVLTLSGVILILMLRPQGLF 299