Pairwise Alignments

Query, 389 a.a., hemolysin secretion protein D from Pseudomonas simiae WCS417

Subject, 377 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (254), Expect = 2e-26
 Identities = 93/362 (25%), Positives = 166/362 (45%), Gaps = 32/362 (8%)

Query: 30  PPGRDTLTTVTVTRGSIENSVTALGTLQPRRYVDVGAQASGQIRKIHVEAGDQVEEGQLL 89
           P     L T+ V+RG+IE    A+G + P   V + +Q +G + +I+V  G  VE+GQ L
Sbjct: 27  PESSSPLPTLNVSRGTIEKQAVAVGQIMPSHSVAIKSQINGIVGEIYVREGQHVEQGQPL 86

Query: 90  VEIDPS-TQKAKLDASRYAIE---NLKAQLQEQKAQHELARQKYQRQQRLTAANATREED 145
           +++ P+ T +A  DAS   ++   NL++ LQ       LA  +   +Q++  AN    +D
Sbjct: 87  IKVRPNPTPQALTDASTELMQSEANLESDLQ------RLANLERLVKQQIIPAN---YDD 137

Query: 146 VQTAKAELSATQARVDMFQAQILQAQASLRSDEAELGYTR----IYAPMTGTVVAVDARV 201
              AKA++ A QA V     Q  Q    +RS EA +G  +    +YAP++GT++ +   V
Sbjct: 138 YVRAKADVKAKQAEVQ----QKRQNLELIRSGEASIGQAKLSSTLYAPISGTILNIKVEV 193

Query: 202 GQTL---NAQQQTPLILRIAKLSPMTVWAEVSEADIGHVKPGMTAYFTTLSGGNRRWTST 258
           G+ +    + Q    ++++A +  +     VSE D   +  GM A  T      +     
Sbjct: 194 GEPIISTESSQAATEMIQLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYPEQVINGQ 253

Query: 259 VRQILPIPPKPLNETQGSGSPNSTSKSGSGRVVLYTVLLDVDNSDNALMAEMTTQVFFVA 318
           + ++  I  + LN  +     N   KS      +    LD+   +  L +  +       
Sbjct: 254 LTKV-AIQSERLNNPE-----NKDGKSFDNGFQVEIGQLDIP-ENMTLRSGFSASAKITL 306

Query: 319 SQVKDALTAPVAALSGTANANQQIAQVVGKNGRIEQRQVQVGISDRLRVQVLDGLSEGDH 378
            +  D +T P  AL         +    G         V++G+SD ++V++L+G++E D 
Sbjct: 307 QRAADVITLPERALQ-FEGETPMVLIADGSAQGYTAHPVKLGLSDGVQVEILEGVAEKDS 365

Query: 379 LL 380
           ++
Sbjct: 366 IV 367