Pairwise Alignments

Query, 160 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 168 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 89.0 bits (219), Expect = 4e-23
 Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 4/151 (2%)

Query: 2   LENYYRELVCFLNAKLGNRQVAEDVVHDAYVRVLERSSDTPIEQPRAFLYRTALNLVIDG 61
           LENY RE+V FL+ + G R  A+D   D + ++ +      ++  R++++R A N+ +D 
Sbjct: 13  LENY-REIVDFLSLRTGCRHAAQDCAQDCWFKLCKARPAEAVDNGRSYVFRVAANIAVDW 71

Query: 62  HRRNALRQVEPLDVLDAEERFASSSPHTHHDHGQR--LELLERALAELPPACRDSFLLRK 119
           HR N  R++       A     ++SP T     QR  LE LE  +  LPP   + F+L +
Sbjct: 72  HRSNG-RELRLQADYAASGDPTATSPDTLETVQQRRNLERLEAIIRALPPRTVEVFVLNR 130

Query: 120 LEGLTHLQIAERLSISRAMVEKHIVNAMKHC 150
           LEGLT+ + A+RL IS + VEKHI   +  C
Sbjct: 131 LEGLTYTETAKRLGISASAVEKHIARVLLQC 161