Pairwise Alignments

Query, 237 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  180 bits (457), Expect = 2e-50
 Identities = 93/215 (43%), Positives = 137/215 (63%), Gaps = 5/215 (2%)

Query: 20  LSGVAMTLWLFIISVVLGFFLSIPLALARVSEHVWLRWPVEVYTYLFRGTPLYIQLLICY 79
           LSG+  T+WL  +S+V+G   +IPLA+AR S+  W   P   Y Y  RGTPL +QL + Y
Sbjct: 14  LSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYLIY 73

Query: 80  TGLYSLEIVQDNALLNQFFRNALNCTLLAFVLNTCAYTVEIFAGAIRNIPHGEIEAARAY 139
            G+     V+D    + +F     C L+AF+LNT AYT EI  GAI  +P GE+EAA+AY
Sbjct: 74  YGMDQWFPVKDTLWEHAWF-----CALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKAY 128

Query: 140 GLHGWRLNLFVVVPAALRRALPAYSNEMILMLHATSLAFTATVADILKVARDANAETFLT 199
           G+  ++    +++P+ALRR+LPAYSNE+I MLH +++A   T+ D+   AR  N+  +  
Sbjct: 129 GMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYAP 188

Query: 200 FQAFGIAALLYMLLSFALVGLFRLAERRWMRFLVP 234
           F+AF  A L YM L+F ++  F+ AE+R++ +L P
Sbjct: 189 FEAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKP 223