Pairwise Alignments

Query, 633 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 758 a.a., histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  255 bits (652), Expect = 4e-72
 Identities = 162/435 (37%), Positives = 249/435 (57%), Gaps = 18/435 (4%)

Query: 196 NTLASGEVVGIFVLIRDITERRRTAEALHQAYQHLEQRVAQRTSELTALNDQLLQEIDER 255
           N L  G   G  V ++D+T   +T E L       E RVA RT+ELT  N +L  E +++
Sbjct: 301 NVLPDG---GFLVELKDVTLETQTTELL-------ENRVAARTAELTRANARLTAEYEQK 350

Query: 256 RRVEARLREAKLEAEQANLSKTKFLAAVSHDLLQPLNAARLFTSALLERPSET----LVR 311
            RVE  LR +K  AE A  SKT+FLAA SHDLLQP+NAA+L  S L E   ET    +V+
Sbjct: 351 ARVEEELRLSKERAEAAVSSKTRFLAAASHDLLQPINAAKLLISTLQEATRETSFQPMVK 410

Query: 312 NVSNSLEDVENLLGTLVDISKLDAGVIKA-DIAPFALSELLDNLAAEYTELARSEGLALH 370
            +  +    ENLL +L+DIS+L++   +A  +    L  L++++  + + LA  +G+ L 
Sbjct: 411 RLKGAFSSAENLLHSLLDISRLESADPEAVSLMAVDLGALMESVRDDQSPLAARKGVRLT 470

Query: 371 FVGCSALVRSDIQLLARILRNLLSNAIRYTY-NGRVVLGCRRQHQRLLIQVWDSGMGIAE 429
            V CS  VRSD   L R ++NL+ NA++YT   GRV++G RR+   ++++VWD+G+GIA+
Sbjct: 471 VVPCSLFVRSDPVYLMRSIQNLVVNAVQYTEPGGRVLVGGRRKGGHVVLEVWDTGVGIAK 530

Query: 430 ERLEEIFQEFKRGDVQRPDQDRGLGLGLAIVEKIAGILGHRISVKSWPGKGSMFSVEVPL 489
           +    IF+EF RGD        G+GLGL+IV++   +LGH +SV+S PG GS+F +++ L
Sbjct: 531 KDQARIFEEFTRGD--DVQLGSGVGLGLSIVDRACRLLGHELSVRSKPGCGSVFRMKIAL 588

Query: 490 SATAPKSLPILAMSEPMLERLQGARVWVLDNDAAICAGMRTLLEGWGCQVITALSEQDLA 549
               P      + +     +     V V++ND  +  G    LE WG  V+ A S ++  
Sbjct: 589 VDGVPIRRKTQSAAADDGGQPIDHIVMVIENDEDVLYGTTQWLEQWGASVLAARSTEEAL 648

Query: 550 RQVDNYHAEADLLIADYHLDDDQNGVDAVARINGRRGRAIPALMITANYSNELKQQIREL 609
             V++     D+++ADY LD    G+ A++ I    G  +PA+MITA+ S+ +++   E 
Sbjct: 649 AHVNDMGIPPDIILADYQLDGPDTGISAISAIRSLTGSDVPAIMITADRSDLVRRLGIEN 708

Query: 610 GHTLMHKPVRPMKLK 624
             T+M KP    +L+
Sbjct: 709 DLTVMTKPAALSRLR 723



 Score = 25.8 bits (55), Expect = 0.007
 Identities = 17/61 (27%), Positives = 27/61 (44%)

Query: 21 KLARINAALIERIESGMAQGNNPYTTFQHSVVLAEQVRERTDALNQAMAELKASNHLLIN 80
          K ARI  AL+ R         + Y +FQ ++ L  QV  ++  L     E + +   L+ 
Sbjct: 16 KQARIIDALVRRANRQSDISPSAYRSFQSAIDLQRQVAAQSLELETVRTERERTRKTLVE 75

Query: 81 A 81
          A
Sbjct: 76 A 76