Pairwise Alignments

Query, 221 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (249), Expect = 2e-26
 Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)

Query: 3   KILIADDHPLFREAIHNVISDGFPGSEVMETADLDSALALTQEHDDLDLILLDLNMPGMH 62
           ++L+ DDHPL R  I+ ++S       V E      A+AL  +    DLILLDLNM GM 
Sbjct: 4   RVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQP-DLILLDLNMKGMS 62

Query: 63  GLNGLINLRNEAPTIPVVIVSAEQDKQVVLQAITYGAVGFITKSSPRLQMTEAIQQILNG 122
           GL+ L  LR +     VVI++       +   +  GA G++ K +   Q+   ++Q + G
Sbjct: 63  GLDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQG 122

Query: 123 NVYLPPDIIRTQKPGTHRRLNENPGFAPELLQALTRKQLLVLERMTKGESNKQIAYTLEI 182
                  + R      +R    NP       +ALT +++ ++  + KG  N+QIA  L I
Sbjct: 123 EKAFSESVERYL---LNREHTSNP------FEALTEREMQIMSEVAKGYRNRQIADRLFI 173

Query: 183 AETTVKAHVSAILRKLNVHNRVQAIL 208
           +E+TVK H+ ++L+KL+V +R  A +
Sbjct: 174 SESTVKVHMKSLLKKLDVPSRTAATI 199