Pairwise Alignments

Query, 263 a.a., multidrug ABC transporter permease from Pseudomonas simiae WCS417

Subject, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 58.2 bits (139), Expect = 2e-13
 Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 16/198 (8%)

Query: 64  VYIIPGLACMILLFNGMQ-GSLSMVYDREMGSMRVLLTSPLPRTFLLCSKLLATALISLL 122
           V I+PGL  +IL    +   S ++V +RE G++ +L+T+P+    L+  K++    + L+
Sbjct: 170 VNIVPGLLGVILTMTMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLI 229

Query: 123 QVYGFLAIA-WVYGVQPPAMGLL--IALPALLLVALMLSALGLLLSNAIRQLENFAGVMN 179
           QV   L +  +++ V  P  G L  I    LL ++  L+ LGL++S           +  
Sbjct: 230 QVAIILGLGHFIFAV--PINGALSQILFGTLLFISASLT-LGLVISTIANTQLQAMQMTV 286

Query: 180 FVIFPLFFLSSALYPLWKMRDSSEWLYWLCAINPFTHAVELVRFALYQRFAGLA----LA 235
           F++ P   LS  ++P   M  +++WL  L    P TH + L+R  +  R A LA      
Sbjct: 287 FILLPSILLSGFMFPYEGMPTAAQWLSELL---PATHFMRLIR-GIVLRGADLADLWRDT 342

Query: 236 VCLGLTVLFA-VLAVLTF 252
           + L L  LF  +LA L F
Sbjct: 343 LWLALFTLFGLMLAALRF 360