Pairwise Alignments

Query, 263 a.a., multidrug ABC transporter permease from Pseudomonas simiae WCS417

Subject, 270 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 14/247 (5%)

Query: 5   WQCLRGIVLREWLRFVLQRTRFLSALVRPLLWLLVFAAGFRAALGISVIEPYDTYIPYEV 64
           W  L  + L+E  RF+     +L  L  PL+  L+F A F  ++G    +     + +  
Sbjct: 21  WLGLWELYLKEVRRFLKV---YLQTLAAPLVTTLIFLAIFALSVGPQTAQGG---LGFME 74

Query: 65  YIIPGLACMILLFNGMQG-SLSMVYDREMGSMRVLLTSPLPRTFLLCSKLLATALISLLQ 123
           ++ PGL  M ++ N     S S++  +  G++  +L  PL  T L  +  L      ++ 
Sbjct: 75  FLAPGLIMMAMVQNAFANTSSSLIIAKVQGNIVDVLMPPLNATELTLAYALGGVTRGVM- 133

Query: 124 VYGFLAIAWVYGVQPPAMGLLIALPALLLVALMLSALGLLLSNAIRQLENFAGVMNFVIF 183
           V  F+A+  +  V      +   +      +LMLS LG++      + ++ A V NF++ 
Sbjct: 134 VGIFVALGMMAFVTLHIHSVFFIVYHAFAASLMLSLLGMIAGIWADKFDHMASVTNFIVT 193

Query: 184 PLFFLSSALYPLWKMRDSSEWLYWLCAINPFTHAVELVRFALY---QRFAGLALAVCLGL 240
           PL FLS   Y + ++ +S   L +L  +NPF + ++  RF      Q      L V  G 
Sbjct: 194 PLSFLSGTFYTIDRLPES---LRFLAHLNPFFYMIDGFRFGFIGHDQAMPITGLVVVGGF 250

Query: 241 TVLFAVL 247
            V+ A +
Sbjct: 251 NVVLAAV 257