Pairwise Alignments

Query, 263 a.a., multidrug ABC transporter permease from Pseudomonas simiae WCS417

Subject, 273 a.a., ABC transporter permease protein from Caulobacter crescentus NA1000

 Score = 53.1 bits (126), Expect = 6e-12
 Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 32/259 (12%)

Query: 5   WQCLRGIVLREWLRFVLQRTRFLSA-LVRPLLWLLVFAAGFRAALGISVIEPYDTYIPYE 63
           W     +  RE  RF    T+ ++A +V  LL++LVF      A+G S   P    + + 
Sbjct: 21  WSGFVTLYQREIRRFWKVGTQTVAAPVVTTLLYMLVFVV----AVGAS--RPAVGGVTFG 74

Query: 64  VYIIPGLACMILLFNGM-QGSLSMVYDREMGSMRVLLTSPLPRTFLLCSKLLATALISLL 122
            ++ PGL  M +L N     S S++  + MG     LT PL     + +  L  A   + 
Sbjct: 75  HFVAPGLIMMAILNNAFANSSSSLIQAKMMGLTPDFLTPPLSALEQVSAFALGAATRGV- 133

Query: 123 QVYGFLAIAWVYGVQPPAMGLLIA-----LPALLLVALMLSALGLLLSNAIRQLENFAGV 177
            V G +  A V GV P A GL +A     L   L  +L+L   G+L      + +  A V
Sbjct: 134 -VVGAVT-AIVIGVLPGA-GLSVAHLWAVLYFGLTASLILGLAGVLAGLWAEKFDQLAAV 190

Query: 178 MNFVIFPLFFLSSALYPLWKM----RDSSEWLYWLCAINPFTHAVELVRFALYQRFAGLA 233
            NF+I P+ FLS   Y + K+    R +S +       NPF + ++  R+       G  
Sbjct: 191 TNFLIMPMTFLSGTFYLVDKLPEPFRSASHF-------NPFFYLIDGFRYGFIGHADG-- 241

Query: 234 LAVCLGLTVLFAVLAVLTF 252
            ++ +G+ V   +L V+ F
Sbjct: 242 -SIAIGV-VTAGLLTVVMF 258