Pairwise Alignments

Query, 319 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 324 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  358 bits (918), Expect = e-103
 Identities = 181/313 (57%), Positives = 231/313 (73%), Gaps = 2/313 (0%)

Query: 9   ALLLAAGHAVASTAWVSNEKDNSLSLIDMQTLQVTDTLKVGQRPRGLLLSHDNKLLYICA 68
           A+LL+AG A A+  +VSNE+ N+++++D ++ +V  T   G RPRG+ +S D K LY+CA
Sbjct: 11  AVLLSAGSAEANKVFVSNERGNNITVLDSESWEVIATFPAGNRPRGITISPDGKELYVCA 70

Query: 69  SDSDRVQVMDVATRKIIKELPSGKDPEQFALHPNNRWLYVSNEDDALVTVIDTETAKVLG 128
           SD D V+V D  T K +  LPSG DPE FAL P+   LY++NEDD LVTV+D +T +VL 
Sbjct: 71  SDDDTVRVFDPETYKELHTLPSGPDPELFALDPSGNPLYIANEDDNLVTVVDVKTRQVLA 130

Query: 129 QINVGVEPEGMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRFVEFNHDGS 188
           ++ VGVEPEG+AVSPD K  +NTSETTNM H+ID ST  +  + LVDQRPR+ EF  DG 
Sbjct: 131 EVPVGVEPEGVAVSPDAKTIINTSETTNMAHFIDASTYKIVHNVLVDQRPRYAEFTADGK 190

Query: 189 QLWASAEIGGTVTILDV--ASRAILKTLTFSIKGVHPDKVQPVGIKLSADGKYGFVALGP 246
           +L+ SAEIGGTV+++DV  A   I K +TF + GV P+ +QPVG+K + DG   FVALGP
Sbjct: 191 KLYVSAEIGGTVSVIDVSAAEPKITKKITFEVPGVLPEWLQPVGVKATKDGSRIFVALGP 250

Query: 247 ANHVAVIDAKTFEVLDYLLVGRRVWQMAFTPDEKQLLVTNGVSGDVSVIDVDSLKVIKSV 306
           AN VAVID KT EVLDY LVG+RVWQMAFTP E+ L+ TNG S DVS+IDV + KVI+SV
Sbjct: 251 ANRVAVIDGKTDEVLDYFLVGQRVWQMAFTPGEEFLITTNGNSNDVSIIDVKAEKVIRSV 310

Query: 307 KVGRYPWGVVVTP 319
           +VG  PWGVVV P
Sbjct: 311 QVGEQPWGVVVAP 323



 Score = 57.0 bits (136), Expect = 6e-13
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 10/132 (7%)

Query: 23  WVSNEKDNSLSLIDMQ----------TLQVTDTLKVGQRPRGLLLSHDNKLLYICASDSD 72
           +VS E   ++S+ID+           T +V   L    +P G+  + D   +++    ++
Sbjct: 193 YVSAEIGGTVSVIDVSAAEPKITKKITFEVPGVLPEWLQPVGVKATKDGSRIFVALGPAN 252

Query: 73  RVQVMDVATRKIIKELPSGKDPEQFALHPNNRWLYVSNEDDALVTVIDTETAKVLGQINV 132
           RV V+D  T +++     G+   Q A  P   +L  +N +   V++ID +  KV+  + V
Sbjct: 253 RVAVIDGKTDEVLDYFLVGQRVWQMAFTPGEEFLITTNGNSNDVSIIDVKAEKVIRSVQV 312

Query: 133 GVEPEGMAVSPD 144
           G +P G+ V+PD
Sbjct: 313 GEQPWGVVVAPD 324