Pairwise Alignments

Query, 390 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 390 a.a., conserved hypothetical protein, secreted from Marinobacter adhaerens HP15

 Score =  429 bits (1104), Expect = e-125
 Identities = 215/389 (55%), Positives = 278/389 (71%), Gaps = 3/389 (0%)

Query: 1   MRQLAPYAVICLLAIAWAANGQAAEAPLQVQIGYLGYRPDPGPLLSNVIPEPADAGQRGA 60
           M  L+  A   L+ +A A+  QA    L V+IGYL + PD GP+LSNVIPEP DAG RGA
Sbjct: 1   MSFLSRTAATSLITLAVASPLQAES--LDVRIGYLQWVPDQGPVLSNVIPEPEDAGLRGA 58

Query: 61  ELAIIDSNSTGAFLNQRYSLTTATVDTPDALLAAAQAQHAQGLRLFVVNAPAASLRQLSA 120
           ELAI D+++TG FL Q YSL +   D+ +A +AA  A    GL LFVVNAPA++L+ L+ 
Sbjct: 59  ELAINDNSTTGKFLGQTYSLQSDVADSEEAAIAAFDAMRENGLDLFVVNAPASTLKILTE 118

Query: 121 ALPDS-LLFNAGSPDDSLRSTACLGNVLHTLPSRAMLADALAQFLVVRKWQKALLIVGPT 179
              D+ L+FNAG+ DD+LR+  C  N+LHT+PS +ML DAL Q+L  R+W +  LI GPT
Sbjct: 119 KAGDNTLIFNAGAKDDALRTGQCHVNLLHTMPSYSMLTDALGQWLNQRRWDEVFLITGPT 178

Query: 180 EDDQAYAAALRRAAKRFGVQWVAEKAWRFDNDQRRSAQADMPLFTQTAEYDVVLVADERG 239
           E D+ +A A RR+AKRFG++ V +K W FD D RR+A  ++PLFTQ ++YD V+VAD RG
Sbjct: 179 EADKGWADAFRRSAKRFGLEIVEDKPWTFDADLRRTASKELPLFTQASDYDAVVVADVRG 238

Query: 240 DFGEYVPYQTWYPRPVAGTQGLTPTGWHKTVETYGAAQLQKRFEALAGRWMNDRDFAAWM 299
           DFGEYVP+ TW PRPV GTQG+ P  WH+ VE++GAAQLQ RF  LA R MN  D+AAW 
Sbjct: 239 DFGEYVPFNTWLPRPVVGTQGMAPVTWHRVVESWGAAQLQNRFRELADRDMNSEDYAAWA 298

Query: 300 AVRSIASAVSKLRQVEPMAIRQLEISEQLPLDGFKGRKLSYRPWNGQLRQPIPIVQPRAL 359
           A+RSI +AV+ L  V P  IR    S++  L  FKGRK+++R WNGQ+RQPIP+V PR L
Sbjct: 299 AIRSIGTAVTDLNSVNPTEIRNFLFSDKFQLAAFKGRKVTFRDWNGQMRQPIPLVHPRGL 358

Query: 360 VSTSPQDGFLHPTNEMDSLGYDKPEVTCR 388
           VST+P +GFLHP  E+D+LG+D+PE  CR
Sbjct: 359 VSTAPFEGFLHPNTELDTLGFDRPESECR 387