Pairwise Alignments

Query, 283 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 96.7 bits (239), Expect = 4e-25
 Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 2/183 (1%)

Query: 96  LALMMVATVISVLIGVPLGILSARSNRLRSVLMP--LLDIMQTMPSFVYLIPVLMLFGLG 153
           L  + VATV + ++ V L I+  R      + +   L++I QT P    L   + ++G G
Sbjct: 55  LRTVFVATVAATIVAVSLAIIVTRKAGAEFLPLSRSLVNIGQTFPPVAVLALAVPIYGFG 114

Query: 154 KVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIMA 213
           + P + A  +Y   P+      G+  +   VMEA    G    Q+LF ++LPLALP I+ 
Sbjct: 115 EKPTLIALFLYGLLPIFENALTGLTTLPPTVMEAARGAGMTGRQRLFRIELPLALPVILT 174

Query: 214 GINQTTMMALSMVVIASMIGARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRITQA 273
           GI  + +++L+   I S + AR LGE ++ G+Q+ N+   L+ GL +  LAV+I    Q 
Sbjct: 175 GIRLSVVISLATATIGSTVAARTLGEVIIAGLQSNNLAFVLQGGLIVGALAVLIHDALQG 234

Query: 274 YGR 276
             R
Sbjct: 235 LER 237