Pairwise Alignments

Query, 283 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

 Score =  223 bits (569), Expect = 3e-63
 Identities = 115/269 (42%), Positives = 174/269 (64%), Gaps = 1/269 (0%)

Query: 4   ESFTFSIADWVNGWVDSLVTNYGDVFRHISDTLLWAIVNLEGLLRAAPWWLMLAIVGGVA 63
           ++F   I  ++   +D L+ NY   F  IS  +   +     LL +   +LM+ ++  + 
Sbjct: 3   DTFNLGIGKFLVNLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIV 62

Query: 64  WHATRKVVTTAVIVGLLFLVGAVGLWDKLMQTLALMMVATVISVLIGVPLGILSARSNRL 123
           W  T  + +    V  L ++  +GLWD  M TL+L++ +T+I++L+G+PLGI+ ARS  +
Sbjct: 63  WK-TVNLKSMLYSVFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLV 121

Query: 124 RSVLMPLLDIMQTMPSFVYLIPVLMLFGLGKVPAIFATVIYAAPPLIRLTDLGIRQVDGE 183
            ++L P+LD+MQT+PS  YLIP ++ FG+G+VP + ATVI+A PP I+LT LGI QV  E
Sbjct: 122 STLLDPMLDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNE 181

Query: 184 VMEAINAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSMVVIASMIGARGLGEDVLV 243
           ++E   AFG   WQ L  ++LP A+PSIM G+NQ  M++ SMVVIA  IG+ GLGE ++ 
Sbjct: 182 LIEVGRAFGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIIS 241

Query: 244 GIQTLNVGRGLEAGLAIVILAVVIDRITQ 272
           GIQ  ++   LEAG+A+  LAV+ DRIT+
Sbjct: 242 GIQRYSLAPALEAGIAVTFLAVIFDRITR 270