Pairwise Alignments

Query, 283 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 344 a.a., binding-protein-dependent transport systems inner membrane component from Marinobacter adhaerens HP15

 Score =  213 bits (542), Expect = 5e-60
 Identities = 113/235 (48%), Positives = 166/235 (70%), Gaps = 4/235 (1%)

Query: 43  LEGLLRA---APWWLMLAIVGGVAWHATRKVVTTAVIVGLLFLVGAVGLWDKLMQTLALM 99
           L+G L A    PWW+++ ++  V +  T+       + G + L+  +  +D  MQTLA++
Sbjct: 99  LDGALYAMLNTPWWIVIPLLLAVVYVVTKSWKLMLFVGGSIVLLAFIDHYDYAMQTLAII 158

Query: 100 MVATVISVLIGVPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLGKVPAI- 158
            V   + VL+GVP+GI  ARSN L+ +++P+LD++QT+P FVYLIP++ LF + +     
Sbjct: 159 FVCAFLCVLLGVPIGIAMARSNSLQRMIIPVLDMLQTLPPFVYLIPLIFLFSVTESKLYG 218

Query: 159 FATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIMAGINQT 218
            A ++YA  P+IRLT+LGIR VD +V+EA +AFG    Q+L+ VQ+PLALP+IMAG+NQT
Sbjct: 219 IAIILYAIVPVIRLTNLGIRLVDKDVIEAADAFGMTPRQKLYKVQIPLALPNIMAGVNQT 278

Query: 219 TMMALSMVVIASMIGARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVIDRITQA 273
            MM+L+MVVIAS++ A GLG  VL GI+ L +G GL +GL IVILAV++DR+T+A
Sbjct: 279 IMMSLAMVVIASLVSAPGLGVLVLRGIRNLELGVGLVSGLGIVILAVILDRVTKA 333