Pairwise Alignments

Query, 283 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 513 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  214 bits (545), Expect = 3e-60
 Identities = 111/260 (42%), Positives = 167/260 (64%), Gaps = 1/260 (0%)

Query: 13  WVNGWVDSLVTNYGDVFRHISDTLLWAIVNLEGLLRAAPWWLMLAIVGGVAWHATRKVVT 72
           WV  ++   V N    F  ++  +   +  LE +L   PW ++ +++  + W  T  + T
Sbjct: 251 WVEDFIAWTVRNTEAFFDALTFGIRTLLDALEVILVQTPWIVIASLIVLLTW-LTAGLRT 309

Query: 73  TAVIVGLLFLVGAVGLWDKLMQTLALMMVATVISVLIGVPLGILSARSNRLRSVLMPLLD 132
                  L  +G +G W+  M TLAL+  A  +S++IG+PLG+ +AR  R  + + P++D
Sbjct: 310 AIYSSAFLAYMGLLGFWEAAMTTLALLGTAACLSIVIGIPLGMFAARRPRFYAFIQPIMD 369

Query: 133 IMQTMPSFVYLIPVLMLFGLGKVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFG 192
            MQTMP+FV+++PV+  FG+GK  A+  T+I+   P++RLT LG+R V   V EA  +FG
Sbjct: 370 FMQTMPAFVFMVPVIAFFGVGKPAAVIVTMIFGGTPVVRLTVLGLRGVPESVREAAISFG 429

Query: 193 ANRWQQLFGVQLPLALPSIMAGINQTTMMALSMVVIASMIGARGLGEDVLVGIQTLNVGR 252
           AN+W  L  V LPLA PSI AGINQT M++L+MVV+AS+IGA+GLGEDVL  +Q  NVG+
Sbjct: 430 ANKWYLLTKVDLPLAGPSIRAGINQTIMLSLAMVVVASLIGAKGLGEDVLEALQYANVGQ 489

Query: 253 GLEAGLAIVILAVVIDRITQ 272
           G+ AG +I+  A+++DRI Q
Sbjct: 490 GILAGFSILFCAMILDRIVQ 509