Pairwise Alignments

Query, 426 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  314 bits (804), Expect = 4e-90
 Identities = 170/448 (37%), Positives = 273/448 (60%), Gaps = 24/448 (5%)

Query: 1   MDALILLGSFIALILIGMPVAYALGLSALIGAWWIDIPFQALMIQVAGGV--NKFSLMAI 58
           M   +L    I ++++G+P+A +LGLS+++   W      A + Q         ++L+AI
Sbjct: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAI 60

Query: 59  PFFVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVG 118
           PFF+LA   M+ GG+++R++ FA  +VG+ RGGL++ +++A   F A+SGSS A   ++G
Sbjct: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120

Query: 119 SVLIPEMERRGYPREFATAVTVSGSVQALLTPPSHNSVLYSLAAGGSVSIASLFMAGVVP 178
           S++I  M + GY +EFA  V  +     +L PPS   V+YS A   +VS+  +F+ GVVP
Sbjct: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAAT--NVSVGRMFLGGVVP 178

Query: 179 GLLMSACLMVLCLIFAKKRNYPKGEVIPLKQALKICADALWGLMAMVIILGGILSGIFTA 238
           GLL    L++   I A+ +N PK   +  K+ALK   +A WGL+ +VIILGGI  GIFT 
Sbjct: 179 GLLAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTP 238

Query: 239 TESAAIAVLWAFFVTMFIYRDY-----KWSELPKLM-------HRTVRTIS--------I 278
           TE+AA+A +++FF+  FIYRD      K +  P L+       H+  +           +
Sbjct: 239 TEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIM 298

Query: 279 VMILIAFAASFGYIMTLMQIPAKITTLFLTLSDNRYVILMCINAMLLLLGTVMDMAPLIL 338
           +M +IA A    +++T  +IP  IT   L+        L+ +N +LL+ G  M+ + L++
Sbjct: 299 LMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLV 358

Query: 339 ILTPILLPVVLGIGVDPVHFGMIMLVNLGIGLITPPVGAVLFVGAAVGKVSIEKTVKALL 398
           I+ P++ P+ + +G+DP+H G++M+VN+ IG+ITPPVG  LFV + V K+S+   VKA L
Sbjct: 359 IVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAAL 418

Query: 399 PFYGVLFLVLMAVTYIPALSLWLPSVVL 426
           P+ GV+FL L+ VTY+P +S WLP++++
Sbjct: 419 PWVGVMFLFLIIVTYVPWVSTWLPTLLM 446