Pairwise Alignments

Query, 320 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

Subject, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  128 bits (322), Expect = 2e-34
 Identities = 79/306 (25%), Positives = 142/306 (46%), Gaps = 9/306 (2%)

Query: 4   KRTLLAAACFALSSAAHALEIKFADIHPAGYPTVVAEENMGKALTQASNGELTFKYFPGG 63
           K T+      A +S   A  +K       G     + + +   L + S GE+    +P  
Sbjct: 6   KITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSA 65

Query: 64  VLGSEKEVVEQAQVGAIQMTRVSLGIVGPVVPDVNVFNLPFVFRDQAHMRKVIDGEIG-- 121
            LG ++ +++Q  +G + +T    G +G  +P      LP+V +D  H+R++ + + G  
Sbjct: 66  QLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQG 125

Query: 122 --DEILAKITDSEFGLVALAWMDGGTRNLYTKKPVRKIEDLKGMKIRVQGNPLFIEAFNE 179
             DE+L K     F   AL     GTR   + +P+  IED KG+K+RV      +     
Sbjct: 126 VRDEMLQK-----FNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL 180

Query: 180 MGANGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHFQNAKYYTLTEHLILPEPIVMSK 239
            GA+   M   E++ ALQT  +DG EN  PT+     ++  K   +T H++  + +++S+
Sbjct: 181 SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE 240

Query: 240 ITWNKLTPAQQDMVKKAAKAAQADERVLWDAKSASSETKLKAAGVEFITVDKKPFYDATA 299
            TW KL+   +D+++KA +            + A   +  K+ G+     D +PF +A  
Sbjct: 241 STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQ 300

Query: 300 PVRAKY 305
           P+  ++
Sbjct: 301 PLYKEF 306