Pairwise Alignments

Query, 320 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

Subject, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

 Score =  145 bits (366), Expect = 1e-39
 Identities = 98/295 (33%), Positives = 151/295 (51%), Gaps = 11/295 (3%)

Query: 4   KRTLLA--AACFALSSAAHAL------EIKFADIHPAGYPTVVAEENMGKALTQASNGEL 55
           ++ LLA  A  F LS+AA A        I+ ++     +P     + M   L Q S G+L
Sbjct: 2   RKLLLATTAIAFGLSAAAPAFAEFNDRNIRVSNGINEDHPVGNGIKAMQACLDQKSGGKL 61

Query: 56  TFKYFPGGVLGSEKEVVEQAQVGAIQMTRVSLGIVGPVVPDVNVFNLPFVFRDQAHMRKV 115
               F GG LG + +  +  + G  +    S   +  ++P + VF+LPF+F +      V
Sbjct: 62  KLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGIIPALGVFDLPFLFANAQEAYTV 121

Query: 116 IDGEIGDEILAKITDSEFGLVALAWMDGGTRNLYTK-KPVRKIEDLKGMKIRVQGNPLFI 174
           +DG+ GD +  K+  +  GLV LA+ + G RNL    +PV K ED +GMK+RV  N +F+
Sbjct: 122 LDGDFGDMMNEKLEAA--GLVNLAYWENGFRNLSNSVRPVTKWEDFEGMKVRVMQNNIFL 179

Query: 175 EAFNEMGANGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHFQNAKYYTLTEHLILPEP 234
           + F  +GAN   M  GE+FSAL+T  ID  EN   T+     F+  KY T T H   P  
Sbjct: 180 DTFQNLGANATPMAFGEVFSALETKAIDAQENPYVTIDTSKFFEVQKYVTETNHAYTPFL 239

Query: 235 IVMSKITWNKLTPAQQDMVKKAAKAAQADERVLWDAKSASSETKLKAAGVEFITV 289
            + SK  ++  TP +Q  +++ A   + +ER +    +  S  K+K AG+E  T+
Sbjct: 240 FLFSKPIFDSYTPEEQAALRECAVVGRDEERKVIQDLNKKSLEKIKEAGLEVNTL 294