Pairwise Alignments

Query, 420 a.a., porin from Pseudomonas simiae WCS417

Subject, 420 a.a., tricarboxylate porin (from data) from Pseudomonas stutzeri RCH2

 Score =  315 bits (806), Expect = 2e-90
 Identities = 173/411 (42%), Positives = 241/411 (58%), Gaps = 11/411 (2%)

Query: 15  LGLGSLAFTLPLSVQADGFIEDAKATLNLRNAYFNRNFTNPTNPQGKAEEWTQNFILDAK 74
           L L   A +L    QA  FIED+ ATL  +N Y NR+F   +  Q K EEWTQ FILD +
Sbjct: 14  LALAVAAASLAPLAQA-AFIEDSSATLQTQNIYLNRDFREGSG-QSKREEWTQGFILDVQ 71

Query: 75  SGYTTGTVGFGIDVLGLYSQKLDGGKGTGGTQLLPIHSDGRPADNFGRLGVALKTKLSKT 134
           SG+T GTVG G+D LG+   KLD G G  GT LLP+H DG   D F RLG+  K K+++T
Sbjct: 72  SGFTEGTVGVGLDALGMLGIKLDSGGGRTGTDLLPVHDDGSTPDEFSRLGLTAKAKIAET 131

Query: 135 ELKVGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDASMEDM 194
           EL+ G  +P +P++++ D R+LPQ F GG  TS +I GLTL GG+      R   + +D+
Sbjct: 132 ELRYGSHIPEMPVVKASDSRTLPQVFEGGTATSKDIEGLTLIGGRLDKVIDRASTNSQDL 191

Query: 195 FMNGK-----AAFTSDRFNFGGGEYSFNDKRTQVGVWYAELSDIYQQQYFNLTHSQPVGD 249
            +N K      A  +D   F G EY+FN K      +Y EL D+Y+Q +F L   +P+ D
Sbjct: 192 QLNNKNSRFAGAAEADHLTFAGAEYAFN-KNLTGRYYYGELDDVYRQHFFGLLAVKPLTD 250

Query: 250 -WTLGANLGFFTGKEDGSALAGDLDNKTAFALLSAKYNGNTFYVGLQKLTGDSVWMRVNG 308
              L A+L      + G+A AG +DN+    +L     G+   +G Q++ GD+ +  ++G
Sbjct: 251 NSALSADLRVMFSDDTGAANAGKIDNQAWNGMLGYSLGGHKVSLGYQQMRGDTGYAYIDG 310

Query: 309 TSGGTLANDSYNASYDNAKEKSWQVRHDFNFVVLGIPGLTLMNRYISGSNVHTGAITDGK 368
            S   L N      + NA E+SWQ R+D+NF  +GIPGLT + RY+SG N      ++G 
Sbjct: 311 -SDPFLVNFVQINDFANADERSWQARYDYNFAAMGIPGLTFLTRYVSGDNAEYNGGSNGS 369

Query: 369 EWGRESELAYTVQSGALKDLNVRWRNSTMRRDFSNNEFDENRLFISYPISL 419
           EW R+ EL Y VQSG LK++ VR RN+  R DF+  + DENRL +SY + +
Sbjct: 370 EWERDIELKYVVQSGPLKNVAVRMRNAMFRSDFA-RDADENRLIVSYSLPI 419