Pairwise Alignments

Query, 424 a.a., Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) from Pseudomonas simiae WCS417

Subject, 304 a.a., dihydroorotate dehydrogenase from Methanococcus maripaludis S2

 Score =  113 bits (283), Expect = 7e-30
 Identities = 93/310 (30%), Positives = 140/310 (45%), Gaps = 45/310 (14%)

Query: 11  IKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLG-------EDPAAVNVSSRYSAH 63
           I+  NP +LA+    +    + R  + G G V  K++G        +P  V V   +   
Sbjct: 9   IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHNNPTMVEVEGGFLNA 68

Query: 64  YG-PNR---EVMGINNIELITDRSLEINLREITQV----KKDWPDRALIVSLMVPCVEES 115
            G PN    E  G   IE I D    +N++ I  +      ++   A I+   V      
Sbjct: 69  MGLPNPGADEYAG--EIERIKDEMKRMNVKIIGSIYGKNDSEFQKAAEIIGNYV------ 120

Query: 116 WKTILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVK 175
                        D +ELN  CPH     G G+++GQ P   + V    K    +PVI K
Sbjct: 121 -------------DVLELNISCPHA--GGGYGSSIGQDPYLCKNVVSAVKDVSDIPVIAK 165

Query: 176 LTPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAV 235
           LTPN+TDI+  A A    GAD +  INT+     +D+E    +P++G +   GG  G AV
Sbjct: 166 LTPNVTDIKEIANAVVNAGADGIVAINTLGPGMVIDIES--GVPILGNRV--GGMSGKAV 221

Query: 236 KPIALNMVAEIARDPQTQGLPICGIGGIGNWRDAAEFVALGCGAVQVCTAAMLHGFRIVE 295
           KPIA+  V +I        +P+ G+GGI    DA EF+  G  AVQV T     G+ I +
Sbjct: 222 KPIAVKNVYDIC---SAVDVPVIGVGGITTGADAIEFMMAGASAVQVGTGVYYRGYDIFQ 278

Query: 296 EMKDGLSRWM 305
           ++ + +  ++
Sbjct: 279 KINNEIEEYL 288