Pairwise Alignments

Query, 472 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 487 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

 Score =  322 bits (826), Expect = 1e-92
 Identities = 183/468 (39%), Positives = 271/468 (57%), Gaps = 5/468 (1%)

Query: 5   LKPLA-ALMLLALQGCSMAPTYQVPAVDLPAGYREQTSDGPWHSAQPSDQLAP-EWWTLY 62
           ++P A  L ++ L  C++ P YQ P++  PA ++       W +A PSD +    WW +Y
Sbjct: 15  IRPFALGLCVVLLSACAVGPDYQKPSMAAPAQFKAAQG---WRTATPSDGMGKGAWWEVY 71

Query: 63  NDSRLNDLQQQLLKANPDLAAALAHFDASQAYASQLHAGLFPQISASAQPLRQRQSDSRP 122
            D +LN L ++L  +N  +A   A +  +Q       A   P +  +    R  Q     
Sbjct: 72  KDPQLNALVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTGKTRSGQGTGTS 131

Query: 123 LRGDTQPSVYNSNTAGFSLSYDLDLWGKIRNQVAAGDAQAQASGDDLAVARLSLQHQLAT 182
             G +   + NS  A   +S++ D+WGK+R  + A  A AQAS  DLA  RLSLQ +L  
Sbjct: 132 NSGTSASGIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQ 191

Query: 183 LYVQLNGLDAQARILDRSLDDFRQALQLTRSRYEGKIASELDLTRAQNQLAEAKAQWDEI 242
            Y+QL  +D Q R+L+ ++D ++++L LT+++Y   I+    + +AQ QL   +A   ++
Sbjct: 192 NYLQLRVIDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDL 251

Query: 243 RGQRNLTEHAIGELVGVAASDFSLSPSPQLISLPGIPSQLPSHLLQRRPDIAAAERRVFA 302
             QR   E+AI  L+G+A +DF+L  S  +  LP IP  LPS LL+RRPDIAAAER V  
Sbjct: 252 AWQRAQFENAIAVLMGMAPADFNLPASTSIPQLPQIPPGLPSQLLERRPDIAAAERSVMG 311

Query: 303 ANANIGVAKAAWYPDFSLTGLIGGQTQGVGNLLSAGNRYWALGPLVNLPIFDGGRLSANE 362
           ANANIGVA+AA+YPDF+L+   G  +    N +S  NR+W++GP + L +FDGGR SA  
Sbjct: 312 ANANIGVARAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRRSAEV 371

Query: 363 RQAKAEFEEASAHYRSQVLKAVREVEDNLAQLRDLQQEAQDEQAAADAAQHTQSLAMNSY 422
            + +A +++  A YR  VL   +EVE+ L QL+  +QEA   Q A  +A+ +  L  N Y
Sbjct: 372 DRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLTNNQY 431

Query: 423 QAGAVSYLDVVTAQTAALQAQRTLQAVQTRQLQASVGLVTALGGGWHA 470
           +AG + YLDVV  Q  AL  +R++ +V   +L ASV L+ ALGGGW A
Sbjct: 432 KAGLIGYLDVVNVQATALSNERSVLSVLQSRLIASVQLIAALGGGWDA 479