Pairwise Alignments

Query, 472 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 521 a.a., efflux transporter, outer membrane factor lipoprotein, NodT family from Dechlorosoma suillum PS

 Score =  315 bits (806), Expect = 3e-90
 Identities = 185/474 (39%), Positives = 275/474 (58%), Gaps = 10/474 (2%)

Query: 3   PRLKPLAALMLLALQGCSMAPTYQVPAVDLPAGYREQTSDGPWHSAQPSD-QLAPEWWTL 61
           P  KP   L+LLAL GC++ P YQ PAV+ P+ ++E  ++G W +A+P++ +   EWW +
Sbjct: 9   PSFKPALPLLLLALAGCAVTPPYQRPAVETPSAFKEAPAEGQWKTAEPAEARPRGEWWKV 68

Query: 62  YNDSRLNDLQQQLLKANPDLAAALAHFDASQAYASQLHAGLFPQISASAQPLRQRQSDSR 121
           + D  L+ L+ Q   AN DL A LA    ++A      + LFPQ+     P RQR S + 
Sbjct: 69  FADPVLDTLEAQAAVANQDLKAGLARLAQARALQQNARSALFPQVGVGFGPTRQRPSPAS 128

Query: 122 ---PLRGDTQPSVYNSNTAGFSLSYDLDLWGKIRNQVAAGDAQAQASGDDLAVARLSLQH 178
              P   +T P+      A  S+SY+ DL+G++ + VAA  A A          +L++Q 
Sbjct: 129 QGLPAEAETSPATLWRAQA--SVSYEADLFGRVSSGVAAAGADAAQRQALFHSLQLAIQA 186

Query: 179 QLATLYVQLNGLDAQARILDRSLDDFRQALQLTRSRYEGKIASELDLTRAQNQLAEAKAQ 238
            +A  Y  L  LDA A +   ++   +Q LQL + R++     EL+L RA+ +LA A+A+
Sbjct: 187 DVAQAYFSLRELDALAALYADTVALRQQTLQLFQRRFDAGDVGELELARARTELAGAEAE 246

Query: 239 WDEIRGQRNLTEHAIGELVGVAASDFSLSPSPQLISLPGIPSQLPSHLLQRRPDIAAAER 298
              +  QR + EHA+  L+G A + FSL P+P       +P+ LPS LL+RRPDIAAAE+
Sbjct: 247 AVGVERQRAVAEHALAVLLGQAPAAFSLPPAPLGRITVRVPAGLPSALLERRPDIAAAEQ 306

Query: 299 RVFAANANIGVAKAAWYPDFSLTGLIGGQTQGVGNLLSAGNRYWALGPLV----NLPIFD 354
            + AANA IG A+AA++P  SLTG +G ++  +G+L    +R + LGPLV    +LPIFD
Sbjct: 307 AMVAANARIGSARAAFFPRLSLTGALGYESSELGDLFKWSSRAFVLGPLVGTMLSLPIFD 366

Query: 355 GGRLSANERQAKAEFEEASAHYRSQVLKAVREVEDNLAQLRDLQQEAQDEQAAADAAQHT 414
           GG   A   QA A F+E +A YR  VL+A +EVEDNLA LR L +++  +  A  +A   
Sbjct: 367 GGARQAGVDQATAVFDEEAAKYRQSVLQAFKEVEDNLAHLRLLDRQSASQDQAVQSAARA 426

Query: 415 QSLAMNSYQAGAVSYLDVVTAQTAALQAQRTLQAVQTRQLQASVGLVTALGGGW 468
             L+   Y+ GA+SYL V+ A  + LQ +R    +   + +A+V L+ A+GG W
Sbjct: 427 ARLSQLQYREGALSYLGVLDADRSVLQQRRAAVQLDGDRARATVALIRAIGGSW 480